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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4452 and PfGW456L13_4453 are separated by 138 nucleotides
PfGW456L13_4453 and PfGW456L13_4454 are separated by 158 nucleotides
PfGW456L13_4454 and PfGW456L13_4455 are separated by 67 nucleotides
PfGW456L13_4455 and PfGW456L13_4456 are separated by 344 nucleotides
PfGW456L13_4452 - Small-conductance mechanosensitive channel, at 4,976,200 to 4,977,498
_4452
PfGW456L13_4453 - Hydrolase, isochorismatase family, at 4,977,637 to 4,978,281
_4453
PfGW456L13_4454 - Transcriptional regulator, LysR family, at 4,978,440 to 4,979,327
_4454
PfGW456L13_4455 - MadN protein, at 4,979,395 to 4,980,261
_4455
PfGW456L13_4456 - FMN-dependent NADH-azoreductase, at 4,980,606 to 4,981,205
_4456
Group
Condition
PfGW456L13
_4452
PfGW456L13
_4453
PfGW456L13
_4454
PfGW456L13
_4455
PfGW456L13
_4456
carbon source
Putrescine (C)
-0.3
-0.1
-0.9
-0.1
-0.1
carbon source
L-Glutamine (C)
-0.3
-0.3
-0.2
-0.0
-0.2
carbon source
D-Galactose (C)
-0.1
+0.1
-0.6
-0.2
-0.2
carbon source
D-Lactate (C)
-0.3
-0.2
-0.2
-0.2
+0.1
carbon source
D-Gluconic Acid (C)
-0.3
+0.0
-0.3
-0.0
-0.2
carbon source
D-Lactate (C)
-0.0
-0.1
-0.4
-0.1
-0.2
carbon source
L-Malic (C)
-0.4
-0.2
-0.1
+0.1
-0.1
carbon source
a-Ketoglutaric (C)
+0.2
-0.2
-0.4
+0.1
-0.3
carbon source
D-Fructose (C)
-0.2
-0.1
-0.5
+0.2
-0.0
carbon source
L-Lactate (C)
-0.2
+0.2
-0.3
-0.2
-0.2
carbon source
L-Histidine (C)
-0.2
+0.1
-0.2
-0.2
+0.0
nitrogen source
D-Serine (N)
-0.2
-0.2
-0.2
+0.1
-0.1
carbon source
L-Tryptophan (C)
+0.1
-0.2
-0.4
-0.1
+0.2
carbon source
D,L-Lactate (C)
-0.3
-0.1
+0.2
-0.2
-0.0
carbon source
L-Phenylalanine (C)
-0.2
-0.1
-0.2
+0.2
-0.1
carbon source
octanoate (C)
-0.7
+0.1
+0.8
-0.2
-0.4
carbon source
Glycerol (C)
-0.3
+0.2
-0.1
+0.1
-0.1
stress
Aluminum chloride 2.5 mM
-0.0
+0.1
+0.2
-0.3
-0.3
carbon source
D-Alanine (C)
-0.1
+0.1
-0.4
-0.0
+0.2
carbon source
D-Fructose (C)
-0.3
-0.2
+0.4
-0.0
-0.1
carbon source
succinate (C)
-0.1
-0.2
-0.1
+0.3
-0.1
carbon source
L-Asparagine (C)
-0.2
+0.0
-0.3
+0.2
+0.1
nitrogen source
nitrate (N)
-0.2
+0.0
-0.4
+0.2
+0.1
carbon source
D-Glucose (C)
-0.0
+0.0
-0.5
+0.3
+0.0
carbon source
L-Arabinose (C)
-0.1
+0.2
+0.2
-0.0
-0.3
stress
Cisplatin 0.0125 mg/ml
-0.1
-0.0
-0.4
+0.2
+0.2
carbon source
Trisodium citrate (C)
-0.2
+0.2
+0.3
+0.1
-0.3
nitrogen source
L-Asparagine (N)
-0.1
+0.2
+0.3
-0.1
-0.1
nitrogen source
L-Histidine (N)
-0.2
+0.1
+0.5
+0.1
+0.0
stress
Lomefloxacin 0.0004 mM
-0.0
+0.1
+0.2
+0.3
+0.4
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