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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4433 and PfGW456L13_4434 are separated by 5 nucleotides
PfGW456L13_4434 and PfGW456L13_4435 are separated by 348 nucleotides
PfGW456L13_4435 and PfGW456L13_4436 are separated by 9 nucleotides
PfGW456L13_4436 and PfGW456L13_4437 are separated by 55 nucleotides
PfGW456L13_4433 - FIG00955751: hypothetical protein, at 4,956,820 to 4,957,416
_4433
PfGW456L13_4434 - Transcriptional regulator GbuR, at 4,957,422 to 4,958,315
_4434
PfGW456L13_4435 - Agmatinase (EC 3.5.3.11), at 4,958,664 to 4,959,614
_4435
PfGW456L13_4436 - Undecaprenyl pyrophosphate synthase, at 4,959,624 to 4,960,046
_4436
PfGW456L13_4437 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 4,960,102 to 4,961,613
_4437
Group
Condition
PfGW456L13
_4433
PfGW456L13
_4434
PfGW456L13
_4435
PfGW456L13
_4436
PfGW456L13
_4437
stress
Aluminum chloride 5 mM
-1.4
+0.0
-0.3
-0.5
+0.2
carbon source
octanoate (C)
-0.4
-0.0
-0.1
-0.5
-0.7
stress
Benzethonium chloride 0.0125 mM
-1.4
-0.1
-0.0
-0.2
+0.1
nitrogen source
Putrescine (N)
-1.1
-0.2
-0.2
-0.1
+0.2
stress
Dimethyl Sulfoxide 7.5 vol%
-1.1
+0.2
-0.0
-0.3
+0.1
carbon source
a-Ketoglutaric (C)
-0.3
-0.1
+0.4
-1.1
+0.2
carbon source
Putrescine (C)
-0.7
-0.6
+0.4
-0.4
+0.5
carbon source
D-Gluconic Acid (C)
-3.1
+0.0
+0.1
+1.0
+1.3
carbon source
L-Lactate (C)
+0.5
+0.0
-1.1
-0.4
+0.6
nitrogen source
Gly-DL-Asp (N)
-1.0
-0.1
-0.2
+0.6
+0.4
stress
Lomefloxacin 0.0004 mM
+0.1
+0.4
+0.3
-0.8
+0.2
carbon source
L-Glutamine (C)
-1.0
-0.0
+0.1
+0.4
+0.9
carbon source
L-Arabinose (C)
+0.6
+0.0
-0.6
+0.3
+0.3
carbon source
D-Fructose (C)
+0.6
-0.5
+0.4
-0.1
+0.6
carbon source
L-Tryptophan (C)
+1.4
+0.2
+0.1
-0.5
-0.1
carbon source
D-Mannose (C)
+0.4
-0.0
-0.2
+0.3
+0.7
carbon source
Trisodium citrate (C)
+1.3
-0.3
-0.2
+0.0
+0.3
carbon source
L-Arabinose (C)
+1.2
+0.1
-0.1
-0.2
+0.3
carbon source
D-Galactose (C)
+0.9
+0.3
-0.1
+0.2
+0.2
carbon source
L-Valine (C)
+1.2
-0.0
+0.1
+0.3
-0.0
carbon source
D,L-Lactate (C)
+0.9
-0.0
+0.1
+0.2
+0.5
carbon source
a-Ketoglutaric (C)
+0.8
-0.0
+0.0
+0.4
+0.5
carbon source
D-Glucosamine Hydrochloride (C)
+1.4
-0.0
+0.2
+0.3
+0.0
carbon source
D-Lactate (C)
+1.6
-0.1
-0.0
-0.1
+0.4
carbon source
D-Lactate (C)
+1.3
-0.1
+0.4
-0.0
+0.4
carbon source
D-Gluconic Acid (C)
+1.1
+0.2
-0.0
-0.5
+1.5
carbon source
D-Fructose (C)
+1.7
+0.0
+0.3
+0.0
+0.2
carbon source
D-Serine (C)
+0.5
+0.2
-0.2
+0.2
+1.8
carbon source
L-Glutamine (C)
+1.0
-0.3
-0.0
+1.0
+1.0
carbon source
D-Serine (C)
+0.6
+0.0
-0.1
+1.5
+2.5
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PfGW456L13_4435
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