Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4413 and PfGW456L13_4414 overlap by 44 nucleotidesPfGW456L13_4414 and PfGW456L13_4415 are separated by 192 nucleotidesPfGW456L13_4415 and PfGW456L13_4416 are separated by 27 nucleotidesPfGW456L13_4416 and PfGW456L13_4417 are separated by 147 nucleotides PfGW456L13_4413 - Potassium uptake protein TrkH, at 4,926,574 to 4,928,028 _4413 PfGW456L13_4414 - Transcriptional regulator, AraC family, at 4,927,985 to 4,929,013 _4414 PfGW456L13_4415 - FIG027190: Putative transmembrane protein, at 4,929,206 to 4,929,517 _4415 PfGW456L13_4416 - Metal-dependent phosphohydrolase, HD subdomain, at 4,929,545 to 4,930,135 _4416 PfGW456L13_4417 - Ser/Thr protein phosphatase family protein, UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.-) homolog, at 4,930,283 to 4,931,098 _4417
Group Condition PfGW456L13_4413 PfGW456L13_4414 PfGW456L13_4415 PfGW456L13_4416 PfGW456L13_4417
carbon source Trisodium citrate (C) -1.0 -0.2 -0.2 -0.2 -0.2
stress Vancomycin 0.5 mg/ml -1.2 -0.2 +0.0 +0.1 -0.0
carbon source D-Glucose (C) -0.7 -0.4 -0.1 +0.1 -0.2
lb LB -0.8 -0.1 +0.1 -0.2 -0.3
carbon source a-Ketoglutaric (C) -0.3 +0.3 -0.5 +0.0 -0.5
nitrogen source L-Valine (N) -0.9 -0.1 -0.0 +0.1 -0.1
carbon source L-Valine (C) -0.8 +0.1 -0.1 -0.0 -0.2
nitrogen source Glycine (N) -0.5 -0.1 -0.0 -0.1 -0.2
control LB control -0.6 -0.0 +0.0 -0.2 -0.2
stress Bacitracin 1 mg/ml -1.0 +0.1 +0.0 -0.0 +0.1
nitrogen source L-Phenylalanine (N) -0.4 -0.3 +0.1 -0.1 -0.1
carbon source D,L-Lactate (C) -0.6 +0.0 +0.2 -0.1 -0.1
stress Fusidic 0.03 mg/ml -0.5 -0.2 +0.1 -0.0 +0.1
stress Vancomycin 0.25 mg/ml -0.7 +0.4 -0.1 -0.1 +0.1
carbon source a-Ketoglutaric (C) -0.5 +0.1 +0.1 -0.3 +0.1
carbon source D-Fructose (C) -0.3 -0.0 -0.1 -0.2 +0.3
carbon source D-Galactose (C) -0.2 -0.5 +0.4 -0.1 -0.1
carbon source L-Valine (C) -0.5 -0.1 +0.0 +0.0 +0.3
carbon source Glycerol (C) +0.3 -0.3 -0.3 -0.0 +0.1
carbon source D-Lactate (C) -0.2 +0.2 -0.4 +0.2 +0.1
carbon source L-Lactate (C) -0.2 -0.4 +0.5 +0.0 +0.2
carbon source L-Arabinose (C) -0.3 -0.1 +0.2 +0.1 +0.3
carbon source L-Malic (C) -0.4 +0.1 +0.4 -0.0 +0.1
carbon source Putrescine (C) -0.1 +0.2 +0.2 +0.2 -0.3
carbon source succinate (C) -0.4 +0.4 -0.1 +0.3 +0.1
carbon source octanoate (C) -0.2 +0.3 +0.3 -0.3 +0.3
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.4 +0.2 +0.3 +0.1 +0.2
stress Lomefloxacin 0.0004 mM +0.7 -0.0 +0.3 +0.0 -0.1
carbon source D-Gluconic Acid (C) -0.3 +0.3 +0.4 +0.3 +0.4
stress nitrate 200 mM +1.2 -0.1 +0.2 -0.0 +0.0
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