Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4405 and PfGW456L13_4406 are separated by 87 nucleotidesPfGW456L13_4406 and PfGW456L13_4407 are separated by 1 nucleotidesPfGW456L13_4407 and PfGW456L13_4408 are separated by 121 nucleotidesPfGW456L13_4408 and PfGW456L13_4409 are separated by 7 nucleotides PfGW456L13_4405 - COG0613, Predicted metal-dependent phosphoesterases (PHP family), at 4,920,567 to 4,921,430 _4405 PfGW456L13_4406 - Intracellular septation protein IspA, at 4,921,518 to 4,922,114 _4406 PfGW456L13_4407 - YciL protein, at 4,922,116 to 4,922,415 _4407 PfGW456L13_4408 - Translation initiation factor 2 (IF-2; GTPase), at 4,922,537 to 4,922,950 _4408 PfGW456L13_4409 - DNA-binding response regulator, at 4,922,958 to 4,923,635 _4409
Group Condition PfGW456L13_4405 PfGW456L13_4406 PfGW456L13_4407 PfGW456L13_4408 PfGW456L13_4409
stress Lomefloxacin 0.0004 mM -0.2 N.D. -0.4 N.D. -1.4
carbon source D-Gluconic Acid (C) -0.2 N.D. +0.4 N.D. -2.0
carbon source a-Ketoglutaric (C) +0.1 N.D. -1.2 N.D. -0.7
carbon source Trisodium citrate (C) -0.1 N.D. -0.7 N.D. -0.9
carbon source L-Arabinose (C) -0.1 N.D. +0.2 N.D. -1.6
carbon source D-Lactate (C) -0.2 N.D. -1.0 N.D. -0.4
nitrogen source L-Threonine (N) +0.0 N.D. -0.2 N.D. -1.1
stress Dimethyl Sulfoxide 7.5 vol% -0.0 N.D. +0.0 N.D. -1.3
carbon source D-Lactate (C) -0.2 N.D. -0.3 N.D. -0.8
carbon source octanoate (C) -0.4 N.D. -0.3 N.D. -0.6
nitrogen source D-Serine (N) -0.6 N.D. +0.0 N.D. -0.6
stress D-Cycloserine 0.125 mg/ml -0.1 N.D. -0.1 N.D. -1.0
carbon source D-Alanine (C) -0.3 N.D. -0.2 N.D. -0.7
carbon source D-Serine (C) -0.4 N.D. -0.1 N.D. -0.5
carbon source a-Ketoglutaric (C) -0.0 N.D. -0.2 N.D. -0.7
carbon source D,L-Lactate (C) +0.0 N.D. -0.3 N.D. -0.7
nitrogen source Gly-Glu (N) +0.3 N.D. -0.6 N.D. -0.6
nitrogen source L-Tryptophan (N) +0.1 N.D. +0.2 N.D. -1.2
carbon source L-Arabinose (C) -0.1 N.D. +0.3 N.D. -1.0
carbon source D-Glucose (C) +0.5 N.D. -0.9 N.D. -0.3
nitrogen source Gly-DL-Asp (N) +0.5 N.D. -0.7 N.D. -0.3
nitrogen source L-Aspartic Acid (N) -0.3 N.D. -0.4 N.D. +0.3
carbon source L-Tryptophan (C) +0.2 N.D. -0.6 N.D. +0.1
carbon source D-Gluconic Acid (C) +0.2 N.D. +0.3 N.D. -0.5
nitrogen source L-Arginine (N) -0.1 N.D. -0.4 N.D. +0.5
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.1 N.D. -0.3 N.D. +0.6
carbon source Putrescine (C) +0.3 N.D. -0.2 N.D. +0.5
carbon source D-Fructose (C) +0.2 N.D. -0.1 N.D. +0.8
carbon source D-Galactose (C) +0.2 N.D. +0.7 N.D. +0.5
carbon source L-Lactate (C) -0.1 N.D. +0.3 N.D. +1.2
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