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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4370 and PfGW456L13_4371 are separated by 125 nucleotides
PfGW456L13_4371 and PfGW456L13_4372 overlap by 27 nucleotides
PfGW456L13_4372 and PfGW456L13_4373 overlap by 41 nucleotides
PfGW456L13_4373 and PfGW456L13_4374 are separated by 29 nucleotides
PfGW456L13_4370 - Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase, at 4,880,059 to 4,881,249
_4370
PfGW456L13_4371 - O-antigen biosynthesis protein, at 4,881,375 to 4,884,299
_4371
PfGW456L13_4372 - hypothetical protein, at 4,884,273 to 4,884,392
_4372
PfGW456L13_4373 - Cephalosporin hydroxylase, at 4,884,352 to 4,885,080
_4373
PfGW456L13_4374 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89), at 4,885,110 to 4,885,775
_4374
Group
Condition
PfGW456L13
_4370
PfGW456L13
_4371
PfGW456L13
_4372
PfGW456L13
_4373
PfGW456L13
_4374
carbon source
D-Fructose (C)
-0.1
-0.0
-0.8
-0.0
-0.4
carbon source
L-Glutamine (C)
-0.2
-0.2
-0.7
-0.2
+0.2
nitrogen source
Gly-DL-Asp (N)
-0.1
-0.0
-0.4
-0.1
-0.4
carbon source
L-Alanine (C)
-0.1
-0.1
-0.2
-0.1
-0.6
nitrogen source
L-Threonine (N)
-0.0
-0.0
-0.1
-0.2
-0.6
carbon source
D-Glucose (C)
+0.1
-0.1
-0.2
-0.1
-0.5
stress
Aluminum chloride 2.5 mM
+0.1
-0.1
-0.1
-0.2
-0.5
carbon source
D-Lactate (C)
+0.1
-0.3
-0.6
-0.1
+0.1
nitrogen source
L-Arginine (N)
-0.1
-0.2
-0.1
+0.0
-0.4
nitrogen source
L-Alanine (N)
-0.2
-0.1
-0.2
+0.1
-0.3
nitrogen source
L-Aspartic Acid (N)
-0.1
-0.1
+0.2
-0.1
-0.5
nitrogen source
L-Asparagine (N)
-0.1
-0.0
+0.0
+0.1
-0.6
carbon source
Trisodium citrate (C)
+0.3
-0.1
-0.3
-0.4
+0.0
carbon source
octanoate (C)
-0.0
-0.0
-0.7
+0.3
+0.0
stress
Chloride 400 mM
-0.0
-0.0
+0.2
-0.1
-0.5
carbon source
succinate (C)
+0.1
-0.1
-0.4
+0.2
-0.2
carbon source
D-Alanine (C)
+0.2
-0.2
-0.1
-0.0
-0.3
carbon source
D-Galactose (C)
+0.0
+0.1
-0.1
+0.1
-0.5
nitrogen source
NAG (N)
-0.1
-0.1
+0.2
+0.2
-0.4
carbon source
D-Alanine (C)
+0.1
-0.1
-0.3
-0.1
+0.3
stress
Paraquat dichloride 0.032 mg/ml
-0.1
-0.1
+0.4
+0.0
-0.3
carbon source
L-Lactate (C)
+0.0
-0.2
+0.4
+0.2
-0.5
nitrogen source
L-Citrulline (N)
-0.1
+0.0
+0.2
+0.2
-0.3
carbon source
D-Gluconic Acid (C)
-0.2
+0.1
-0.3
-0.0
+0.6
carbon source
L-Phenylalanine (C)
+0.1
+0.2
-0.2
+0.0
+0.3
carbon source
L-Arabinose (C)
-0.0
+0.2
-0.3
+0.3
+0.2
carbon source
a-Ketoglutaric (C)
+0.0
-0.3
+0.3
+0.0
+0.5
carbon source
L-Malic (C)
+0.0
+0.2
-0.0
+0.1
+0.5
carbon source
L-Arabinose (C)
+0.0
+0.2
+0.1
+0.1
+0.5
stress
Lomefloxacin 0.0004 mM
+0.1
+0.1
+0.2
-0.1
+0.8
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