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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4323 and PfGW456L13_4324 are separated by 1 nucleotides
PfGW456L13_4324 and PfGW456L13_4325 are separated by 43 nucleotides
PfGW456L13_4325 and PfGW456L13_4326 are separated by 12 nucleotides
PfGW456L13_4326 and PfGW456L13_4327 are separated by 29 nucleotides
PfGW456L13_4323 - hypothetical protein, at 4,835,478 to 4,835,606
_4323
PfGW456L13_4324 - Chromosome (plasmid) partitioning protein ParA, at 4,835,608 to 4,836,396
_4324
PfGW456L13_4325 - Flagellar motor rotation protein MotB, at 4,836,440 to 4,837,330
_4325
PfGW456L13_4326 - Flagellar motor rotation protein MotA, at 4,837,343 to 4,838,053
_4326
PfGW456L13_4327 - Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61), at 4,838,083 to 4,839,207
_4327
Group
Condition
PfGW456L13
_4323
PfGW456L13
_4324
PfGW456L13
_4325
PfGW456L13
_4326
PfGW456L13
_4327
nitrogen source
L-Serine (N)
-0.7
-0.0
-0.2
-0.0
-0.0
carbon source
L-Glutamine (C)
+0.1
-0.3
-0.3
-0.5
+0.1
nitrogen source
NAG (N)
-0.4
-0.1
-0.2
+0.1
-0.2
carbon source
D-Gluconic Acid (C)
-0.5
-0.2
+0.4
-0.4
-0.1
carbon source
D-Alanine (C)
-0.4
+0.1
-0.2
+0.1
-0.3
carbon source
a-Ketoglutaric (C)
-0.8
+0.3
-0.2
+0.1
-0.0
nitrogen source
Uridine (N)
+0.1
-0.1
-0.4
-0.1
-0.2
carbon source
succinate (C)
-0.4
+0.2
-0.0
-0.2
-0.2
nitrogen source
L-Citrulline (N)
-0.5
-0.1
+0.2
-0.0
-0.2
carbon source
L-Arabinose (C)
-0.2
+0.3
-0.0
-0.4
-0.1
carbon source
D-Glucose (C)
-0.4
+0.1
-0.3
+0.2
-0.1
nitrogen source
nitrate (N)
-0.1
+0.1
-0.3
-0.2
+0.1
carbon source
D-Lactate (C)
+0.2
-0.1
+0.3
-0.0
-0.7
carbon source
D-Galactose (C)
+0.2
-0.0
+0.3
-0.4
-0.4
carbon source
D-Alanine (C)
+0.1
+0.2
+0.0
-0.2
-0.4
carbon source
D-Mannose (C)
-0.5
+0.1
+0.2
+0.1
-0.1
nitrogen source
L-Threonine (N)
-0.2
+0.2
-0.2
-0.1
+0.2
carbon source
Tween 20 (C)
+0.3
+0.0
+0.1
-0.2
-0.3
stress
Fusidic 0.03 mg/ml
-0.3
-0.1
+0.3
-0.1
+0.2
carbon source
D-Lactate (C)
+0.6
-0.0
-0.0
-0.5
+0.0
carbon source
D-Galactose (C)
-0.2
+0.2
+0.4
-0.3
+0.0
carbon source
L-Valine (C)
+0.6
+0.2
-0.2
-0.3
+0.0
carbon source
Glycerol (C)
-0.2
+0.1
+0.3
-0.1
+0.3
carbon source
Putrescine (C)
+0.9
+0.3
-0.0
-0.4
-0.4
stress
Nickel (II) chloride 1 mM
+0.2
+0.2
-0.3
+0.1
+0.3
carbon source
a-Ketoglutaric (C)
+0.1
+0.1
+0.4
+0.2
-0.4
carbon source
L-Malic (C)
+0.3
+0.2
+0.6
+0.0
-0.4
carbon source
octanoate (C)
+0.4
-0.2
+0.4
+0.3
-0.2
stress
Paraquat dichloride 0.032 mg/ml
+0.6
-0.1
+0.2
+0.0
+0.1
carbon source
L-Lactate (C)
+1.1
+0.4
+0.1
+0.2
+0.1
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