Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_41 and PfGW456L13_42 are separated by 35 nucleotidesPfGW456L13_42 and PfGW456L13_43 are separated by 232 nucleotidesPfGW456L13_43 and PfGW456L13_44 are separated by 219 nucleotidesPfGW456L13_44 and PfGW456L13_45 are separated by 302 nucleotides PfGW456L13_41 - hypothetical protein, at 46,954 to 47,715 _41 PfGW456L13_42 - VgrG protein, at 47,751 to 49,070 _42 PfGW456L13_43 - Biosynthetic arginine decarboxylase (EC 4.1.1.19), at 49,303 to 51,216 _43 PfGW456L13_44 - Translation initiation factor SUI1-related protein, at 51,436 to 51,807 _44 PfGW456L13_45 - Putative Nudix hydrolase YfcD (EC 3.6.-.-), at 52,110 to 52,667 _45
Group Condition PfGW456L13_41 PfGW456L13_42 PfGW456L13_43 PfGW456L13_44 PfGW456L13_45
carbon source L-Histidine (C) -0.1 -0.1 +0.1 -1.2 +0.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.1 +0.4 +0.9 -1.8 -0.3
nitrogen source D-Serine (N) -0.0 +0.1 +0.2 -1.2 +0.2
carbon source D-Serine (C) -0.0 -0.1 +0.5 -1.0 +0.1
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.1 +0.3 +0.6 -1.3 -0.1
carbon source D-Serine (C) +0.1 +0.0 +0.6 -1.0 -0.1
carbon source D-Lactate (C) +0.3 -0.4 +0.7 -1.0 +0.3
carbon source D-Gluconic Acid (C) +0.3 +0.2 +0.7 -1.6 +0.4
carbon source a-Ketoglutaric (C) +0.5 +0.1 +0.4 -0.8 -0.0
carbon source L-Glutamine (C) +0.2 -0.1 +0.7 -0.4 +0.1
stress Chloride 400 mM +0.0 -0.1 +0.9 -0.9 +0.6
stress Lomefloxacin 0.0004 mM +0.2 -0.4 -0.0 +1.0 -0.1
nitrogen source L-Glutamic (N) +0.2 +0.4 +0.4 -0.4 +0.2
stress Thallium(I) acetate 0.004 mg/ml -0.2 +0.2 +0.6 +0.4 -0.3
carbon source D,L-Lactate (C) +0.3 -0.0 +1.0 -0.8 +0.3
carbon source D-Fructose (C) -0.0 +0.0 +1.0 -0.3 +0.3
stress Aluminum chloride 2.5 mM +0.0 -0.3 +1.3 -0.2 +0.3
carbon source D-Glucose (C) +0.1 +0.4 +1.0 -0.3 +0.0
nitrogen source D-Alanine (N) -0.1 +0.2 +0.4 +0.7 +0.2
carbon source octanoate (C) -0.1 +0.4 +1.5 +0.0 -0.5
stress Vancomycin 0.125 mg/ml +0.0 +0.2 +0.9 +0.2 +0.1
carbon source L-Malic (C) +0.3 +0.2 +0.7 +0.1 +0.2
stress Bacitracin 1 mg/ml +0.0 -0.0 +0.6 +1.0 -0.0
carbon source L-Alanine (C) +0.3 -0.1 +0.5 +0.7 +0.2
carbon source L-Tryptophan (C) +0.1 +0.0 +1.6 -0.0 +0.1
carbon source D-Mannose (C) +0.3 +0.5 +0.8 +0.4 +0.1
carbon source L-Tryptophan (C) +0.3 -0.1 +1.7 +0.1 +0.1
stress Vancomycin 0.25 mg/ml -0.0 -0.1 +1.2 +0.9 +0.2
stress Vancomycin 0.5 mg/ml +0.0 -0.3 +1.8 +1.9 +0.3
nitrogen source L-Arginine (N) -0.0 +0.3 +3.2 +1.8 +0.2
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