Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4292 and PfGW456L13_4293 overlap by 4 nucleotidesPfGW456L13_4293 and PfGW456L13_4294 are separated by 223 nucleotidesPfGW456L13_4294 and PfGW456L13_4295 are separated by 268 nucleotidesPfGW456L13_4295 and PfGW456L13_4296 are separated by 131 nucleotides PfGW456L13_4292 - Tryptophan 2,3-dioxygenase (EC 1.13.11.11) (from data), at 4,808,562 to 4,809,416 _4292 PfGW456L13_4293 - Kynurenine formamidase, bacterial (EC 3.5.1.9) (from data), at 4,809,413 to 4,810,078 _4293 PfGW456L13_4294 - GlcG protein, at 4,810,302 to 4,810,742 _4294 PfGW456L13_4295 - Glyoxylate carboligase (EC 4.1.1.47), at 4,811,011 to 4,812,786 _4295 PfGW456L13_4296 - Hydroxypyruvate isomerase (EC 5.3.1.22), at 4,812,918 to 4,813,700 _4296
Group Condition PfGW456L13_4292 PfGW456L13_4293 PfGW456L13_4294 PfGW456L13_4295 PfGW456L13_4296
carbon source L-Tryptophan (C) -3.4 -2.8 N.D. -0.3 +0.2
carbon source L-Tryptophan (C) -1.9 -2.1 N.D. -0.4 -0.0
carbon source D-Lactate (C) -1.4 -0.2 N.D. -0.2 +0.2
carbon source L-Lactate (C) -1.4 -0.2 N.D. +0.1 -0.0
carbon source octanoate (C) +0.0 -0.8 N.D. -0.2 -0.4
nitrogen source L-Tryptophan (N) -0.7 -0.5 N.D. -0.2 +0.0
carbon source L-Histidine (C) -0.4 -0.5 N.D. -0.1 -0.1
carbon source L-Glutamine (C) -0.8 -0.2 N.D. -0.2 +0.2
carbon source D-Glucosamine Hydrochloride (C) -0.6 -0.2 N.D. -0.1 -0.1
carbon source D-Mannose (C) -0.1 -0.4 N.D. +0.1 -0.4
carbon source L-Histidine (C) -0.4 -0.3 N.D. -0.1 -0.0
nitrogen source L-Valine (N) -0.1 -0.4 N.D. -0.2 +0.0
carbon source D-Glucose (C) -0.0 -0.5 N.D. +0.1 -0.2
carbon source D-Galactose (C) +0.3 +0.0 N.D. -0.3 -0.4
carbon source D-Fructose (C) -0.2 -0.4 N.D. +0.1 +0.2
carbon source D-Serine (C) +0.3 -0.0 N.D. -0.1 -0.4
nitrogen source NAG (N) +0.3 +0.1 N.D. -0.2 -0.3
nitrogen source Putrescine (N) +0.4 -0.3 N.D. -0.1 -0.1
carbon source D,L-Lactate (C) +0.3 -0.3 N.D. +0.1 +0.1
carbon source D-Galactose (C) +0.6 -0.3 N.D. -0.1 +0.2
carbon source L-Arabinose (C) +0.4 -0.2 N.D. +0.2 -0.1
stress Aluminum chloride 2.5 mM +0.3 +0.4 N.D. +0.0 -0.2
nitrogen source L-Phenylalanine (N) +0.6 -0.1 N.D. -0.1 +0.1
stress Vancomycin 0.25 mg/ml +0.6 -0.2 N.D. -0.1 +0.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.4 +0.2 N.D. +0.1 -0.1
nitrogen source L-Threonine (N) +0.4 +0.2 N.D. +0.1 +0.2
nitrogen source L-Leucine (N) +0.8 -0.1 N.D. +0.1 +0.1
stress Lomefloxacin 0.0004 mM +1.0 +0.2 N.D. -0.1 -0.0
carbon source L-Alanine (C) +1.0 +0.5 N.D. +0.0 -0.3
carbon source L-Alanine (C) +1.3 +0.8 N.D. -0.2 -0.1
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