Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4287 and PfGW456L13_4288 are separated by 105 nucleotidesPfGW456L13_4288 and PfGW456L13_4289 are separated by 249 nucleotidesPfGW456L13_4289 and PfGW456L13_4290 are separated by 102 nucleotidesPfGW456L13_4290 and PfGW456L13_4291 are separated by 22 nucleotides PfGW456L13_4287 - Outer membrane porin, OprD family, at 4,802,568 to 4,803,881 _4287 PfGW456L13_4288 - Kynureninase (EC 3.7.1.3) (from data), at 4,803,987 to 4,805,237 _4288 PfGW456L13_4289 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 4,805,487 to 4,805,921 _4289 PfGW456L13_4290 - benABC operon transcriptional activator BenR, at 4,806,024 to 4,807,037 _4290 PfGW456L13_4291 - L-tryptophan transporter (from data), at 4,807,060 to 4,808,463 _4291
Group Condition PfGW456L13_4287 PfGW456L13_4288 PfGW456L13_4289 PfGW456L13_4290 PfGW456L13_4291
carbon source L-Tryptophan (C) +0.1 -3.6 -2.5 -0.8 -1.0
carbon source L-Tryptophan (C) +1.0 -3.1 -1.9 -0.6 -1.1
nitrogen source L-Tryptophan (N) +0.2 -1.2 -0.9 +0.2 -0.2
carbon source a-Ketoglutaric (C) -0.3 -0.1 -0.8 -0.2 -0.2
carbon source L-Arabinose (C) -0.2 -0.0 -0.6 -0.1 -0.2
carbon source Putrescine (C) -0.4 +0.1 -0.2 -0.3 -0.1
carbon source octanoate (C) -0.1 -0.0 +0.2 -0.4 -0.5
carbon source L-Valine (C) -0.0 -0.3 +0.1 -0.3 -0.2
carbon source D-Lactate (C) -0.2 +0.0 -0.5 +0.0 +0.0
carbon source Glycerol (C) +0.0 +0.1 -0.2 -0.4 -0.1
carbon source L-Arabinose (C) -0.2 -0.1 +0.1 -0.3 -0.1
carbon source a-Ketoglutaric (C) +0.1 -0.0 -0.1 -0.5 +0.0
carbon source Glycerol (C) -0.2 -0.0 -0.4 +0.0 +0.2
carbon source L-Malic (C) -0.1 +0.1 -0.4 -0.1 +0.2
carbon source D-Galactose (C) -0.0 +0.1 -0.4 +0.1 +0.0
carbon source L-Histidine (C) -0.2 -0.1 -0.2 +0.1 +0.3
carbon source L-Asparagine (C) +0.1 +0.2 -0.4 -0.0 +0.1
nitrogen source Ammonium chloride (N) -0.1 -0.2 +0.4 -0.1 +0.1
carbon source D-Alanine (C) -0.1 +0.1 +0.2 -0.2 +0.2
nitrogen source L-Asparagine (N) +0.1 -0.0 +0.6 -0.1 -0.1
carbon source D-Serine (C) +0.0 +0.3 +0.2 -0.1 +0.1
nitrogen source L-Threonine (N) +0.0 -0.1 +0.6 -0.0 -0.0
carbon source D-Glucose (C) +0.2 -0.1 +0.4 -0.1 +0.1
nitrogen source Gly-Glu (N) +0.2 +0.0 +0.4 -0.1 +0.0
nitrogen source L-Phenylalanine (N) +0.5 -0.1 +0.1 +0.1 -0.0
nitrogen source D-Serine (N) +0.1 +0.0 +0.5 +0.1 -0.1
nitrogen source nitrate (N) +0.1 -0.2 +0.8 +0.0 -0.0
carbon source D-Gluconic Acid (C) +0.2 +0.2 +0.3 -0.1 +0.1
carbon source L-Alanine (C) +0.3 +0.1 +0.4 +0.1 +0.0
stress Aluminum chloride 5 mM +0.3 +0.1 +0.1 +0.2 +0.2
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