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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4202 and PfGW456L13_4203 overlap by 14 nucleotides
PfGW456L13_4203 and PfGW456L13_4204 overlap by 4 nucleotides
PfGW456L13_4204 and PfGW456L13_4205 are separated by 34 nucleotides
PfGW456L13_4205 and PfGW456L13_4206 are separated by 114 nucleotides
PfGW456L13_4202 - ABC transporter permease protein, at 4,713,603 to 4,714,448
_4202
PfGW456L13_4203 - Thiamin ABC transporter, transmembrane component, at 4,714,435 to 4,715,235
_4203
PfGW456L13_4204 - ABC transporter, ATP-binding protein, at 4,715,232 to 4,716,221
_4204
PfGW456L13_4205 - Phosphoserine phosphatase (EC 3.1.3.3), at 4,716,256 to 4,716,909
_4205
PfGW456L13_4206 - Quinone oxidoreductase (EC 1.6.5.5), at 4,717,024 to 4,717,722
_4206
Group
Condition
PfGW456L13
_4202
PfGW456L13
_4203
PfGW456L13
_4204
PfGW456L13
_4205
PfGW456L13
_4206
carbon source
L-Arabinose (C)
+0.5
+0.2
+0.2
-0.0
-2.6
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.0
-0.3
-0.0
+0.0
-0.8
carbon source
D-Fructose (C)
-0.4
+0.1
+0.5
+0.2
-1.3
stress
Lomefloxacin 0.0004 mM
+0.1
+0.1
-0.2
-0.1
-0.8
carbon source
D-Galactose (C)
+0.1
+0.2
-0.5
-0.3
-0.2
carbon source
D-Galactose (C)
+0.1
-0.1
+0.2
-0.2
-0.8
carbon source
D-Lactate (C)
-0.1
+0.2
-0.0
+0.2
-1.0
carbon source
D-Alanine (C)
-0.1
+0.0
+0.1
+0.1
-0.8
carbon source
D-Lactate (C)
+0.1
-0.1
+0.5
-0.1
-1.1
stress
A22 0.04 mg/ml
-0.1
+0.0
+0.2
+0.4
-0.8
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.1
-0.2
+0.2
+0.3
-0.5
carbon source
L-Malic (C)
-0.2
-0.2
+0.2
-0.3
+0.3
carbon source
L-Phenylalanine (C)
+0.2
+0.2
+0.1
-0.2
-0.5
nitrogen source
L-Proline (N)
+0.2
-0.1
+0.1
+0.3
-0.4
carbon source
Putrescine (C)
-0.0
+0.3
-0.6
+0.3
+0.2
carbon source
Glycerol (C)
-0.6
+0.3
+0.1
+0.1
+0.4
nitrogen source
L-Histidine (N)
-0.1
+0.1
-0.3
+0.0
+0.6
carbon source
casaminos (C)
+0.0
-0.1
+0.0
-0.2
+0.9
nitrogen source
L-Citrulline (N)
-0.3
+0.1
-0.1
+0.3
+0.8
carbon source
octanoate (C)
-0.1
-0.1
+0.0
-0.1
+1.1
nitrogen source
nitrate (N)
+0.1
-0.1
-0.1
+0.1
+0.9
carbon source
L-Malic (C)
+0.1
+0.1
+0.5
-0.4
+0.7
nitrogen source
L-Glutamine (N)
+0.2
-0.0
-0.1
-0.0
+0.9
nitrogen source
L-Asparagine (N)
-0.1
-0.1
+0.2
+0.1
+0.8
carbon source
L-Tryptophan (C)
-0.3
+0.1
+0.3
+0.4
+0.5
carbon source
succinate (C)
-0.3
+0.1
+0.0
+0.2
+1.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.4
+0.0
+0.3
-0.1
+0.6
nitrogen source
L-Isoleucine (N)
-0.0
+0.2
+0.1
-0.1
+0.9
nitrogen source
D-Serine (N)
-0.1
+0.0
-0.1
+0.4
+1.0
nitrogen source
L-Arginine (N)
+0.0
+0.1
+0.1
+0.3
+0.7
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PfGW456L13_4204
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