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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4199 and PfGW456L13_4200 overlap by 14 nucleotides
PfGW456L13_4200 and PfGW456L13_4201 overlap by 9 nucleotides
PfGW456L13_4201 and PfGW456L13_4202 overlap by 4 nucleotides
PfGW456L13_4202 and PfGW456L13_4203 overlap by 14 nucleotides
PfGW456L13_4199 - ABC-type Fe3+ transport system, periplasmic component, at 4,711,557 to 4,712,621
_4199
PfGW456L13_4200 - hypothetical protein, at 4,712,608 to 4,712,808
_4200
PfGW456L13_4201 - FIG00956482: hypothetical protein, at 4,712,800 to 4,713,606
_4201
PfGW456L13_4202 - ABC transporter permease protein, at 4,713,603 to 4,714,448
_4202
PfGW456L13_4203 - Thiamin ABC transporter, transmembrane component, at 4,714,435 to 4,715,235
_4203
Group
Condition
PfGW456L13
_4199
PfGW456L13
_4200
PfGW456L13
_4201
PfGW456L13
_4202
PfGW456L13
_4203
carbon source
a-Ketoglutaric (C)
-0.3
-0.6
-0.5
-0.0
-0.5
nitrogen source
L-Citrulline (N)
-0.1
-0.5
-0.1
-0.3
+0.1
carbon source
octanoate (C)
+0.1
-1.0
+0.2
-0.1
-0.1
carbon source
Tween 20 (C)
-0.1
-0.4
-0.3
-0.0
-0.1
carbon source
Trisodium citrate (C)
-0.1
-0.2
-0.0
-0.3
-0.3
carbon source
D-Fructose (C)
-0.0
-0.8
-0.5
+0.3
+0.1
carbon source
L-Glutamine (C)
+0.0
-0.7
-0.2
-0.1
+0.1
carbon source
L-Alanine (C)
+0.0
-0.5
-0.1
-0.2
-0.1
nitrogen source
L-Glutamic (N)
-0.1
-0.5
-0.0
+0.1
-0.2
carbon source
a-Ketoglutaric (C)
+0.1
-0.2
-0.2
-0.5
+0.0
carbon source
succinate (C)
-0.0
-0.4
-0.1
-0.3
+0.1
nitrogen source
Putrescine (N)
-0.1
-0.4
-0.3
+0.0
+0.1
nitrogen source
Uridine (N)
+0.0
-0.5
-0.2
+0.1
-0.0
nitrogen source
L-Leucine (N)
-0.3
-0.3
-0.2
+0.1
+0.1
nitrogen source
L-Proline (N)
-0.0
-0.3
-0.3
+0.2
-0.1
carbon source
D-Gluconic Acid (C)
+0.1
-0.7
+0.2
-0.0
-0.1
carbon source
D-Fructose (C)
+0.1
-0.3
+0.0
-0.4
+0.1
carbon source
D-Gluconic Acid (C)
+0.2
-0.4
-0.3
+0.0
+0.0
carbon source
Glycerol (C)
-0.1
-0.6
-0.0
+0.2
+0.1
carbon source
L-Tryptophan (C)
-0.0
+0.2
-0.3
-0.3
+0.1
nitrogen source
L-Glutamine (N)
-0.1
-0.4
+0.2
+0.2
-0.0
carbon source
L-Valine (C)
+0.0
-0.4
-0.1
+0.1
+0.4
carbon source
Glycerol (C)
+0.2
+0.4
-0.2
-0.6
+0.3
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
-0.3
+0.1
+0.1
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.0
-0.4
+0.3
+0.4
+0.0
carbon source
L-Arabinose (C)
+0.1
-0.2
-0.2
+0.5
+0.2
carbon source
D-Lactate (C)
-0.2
+0.4
+0.1
-0.1
+0.2
carbon source
Putrescine (C)
+0.2
+0.3
+0.1
-0.0
+0.3
carbon source
L-Phenylalanine (C)
+0.1
+0.5
-0.2
+0.2
+0.2
lb
LB
-0.0
+0.9
+0.1
+0.1
-0.1
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