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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_4194 and PfGW456L13_4195 are separated by 207 nucleotides
PfGW456L13_4195 and PfGW456L13_4196 are separated by 36 nucleotides
PfGW456L13_4196 and PfGW456L13_4197 are separated by 126 nucleotides
PfGW456L13_4197 and PfGW456L13_4198 are separated by 819 nucleotides
PfGW456L13_4194 - Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70), at 4,704,949 to 4,705,584
_4194
PfGW456L13_4195 - Aspartyl aminopeptidase, at 4,705,792 to 4,707,081
_4195
PfGW456L13_4196 - FIG00953060: hypothetical protein, at 4,707,118 to 4,707,432
_4196
PfGW456L13_4197 - Potassium efflux system KefA protein / Small-conductance mechanosensitive channel, at 4,707,559 to 4,709,661
_4197
PfGW456L13_4198 - 2-aminoethylphosphonate uptake and metabolism regulator, at 4,710,481 to 4,711,194
_4198
Group
Condition
PfGW456L13
_4194
PfGW456L13
_4195
PfGW456L13
_4196
PfGW456L13
_4197
PfGW456L13
_4198
carbon source
D-Fructose (C)
-0.8
-0.8
-0.9
-0.0
-0.4
carbon source
a-Ketoglutaric (C)
-1.7
-0.3
-0.4
+0.2
-0.1
carbon source
octanoate (C)
-1.8
-0.3
+0.6
+0.0
-0.5
carbon source
D-Gluconic Acid (C)
-0.3
-0.1
-0.8
-0.2
-0.1
carbon source
Glycerol (C)
-0.0
-0.9
-0.6
+0.1
+0.1
carbon source
L-Tryptophan (C)
+0.5
-0.3
-1.0
-0.2
-0.2
carbon source
L-Phenylalanine (C)
-0.3
-0.4
-0.4
+0.0
-0.1
nitrogen source
Ammonium chloride (N)
-0.5
-0.4
-0.1
-0.1
-0.1
carbon source
L-Phenylalanine (C)
-0.9
-0.3
+0.1
+0.0
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.8
-0.0
-0.3
+0.1
-0.1
stress
Nickel (II) chloride 1 mM
+0.6
-0.2
-0.1
-1.0
-0.2
carbon source
D-Lactate (C)
-0.3
-0.6
-0.3
+0.1
+0.1
nitrogen source
L-Glutamic (N)
-0.6
-0.5
+0.3
-0.2
+0.0
stress
Bacitracin 1 mg/ml
-0.5
-0.3
+0.2
-0.2
-0.0
nitrogen source
Gly-DL-Asp (N)
+0.2
-0.2
-0.4
-0.1
-0.3
carbon source
L-Malic (C)
-0.8
-0.1
+0.0
+0.0
+0.2
nitrogen source
L-Glutamine (N)
+0.3
-0.4
-0.4
+0.0
+0.1
stress
Vancomycin 0.25 mg/ml
-0.2
-0.3
+0.6
-0.2
-0.1
carbon source
D-Fructose (C)
+0.3
-0.7
+0.3
-0.1
-0.1
carbon source
Glycerol (C)
+0.4
-0.4
-0.3
+0.0
+0.1
stress
Vancomycin 0.5 mg/ml
+0.1
-0.5
+0.4
-0.2
-0.1
carbon source
D-Galactose (C)
-0.2
-0.6
+0.7
+0.1
-0.1
control
LB control
-0.5
-0.2
+0.5
-0.1
+0.1
stress
Lomefloxacin 0.0004 mM
-0.0
+0.7
-0.6
-0.2
+0.2
stress
Aluminum chloride 5 mM
-0.4
+0.6
+0.5
-0.4
-0.1
carbon source
L-Lactate (C)
+0.4
-0.7
+0.2
+0.3
-0.1
stress
A22 0.04 mg/ml
-0.3
+0.4
-0.3
+0.4
+0.1
nitrogen source
L-Valine (N)
-0.5
+0.1
+0.6
+0.2
+0.0
carbon source
Tween 20 (C)
-0.2
-0.1
+0.4
+0.3
+0.3
stress
Paraquat dichloride 0.032 mg/ml
+0.4
+0.1
+0.2
+0.3
-0.1
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