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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4188 and PfGW456L13_4189 are separated by 115 nucleotides
PfGW456L13_4189 and PfGW456L13_4190 are separated by 132 nucleotides
PfGW456L13_4190 and PfGW456L13_4191 are separated by 109 nucleotides
PfGW456L13_4191 and PfGW456L13_4192 are separated by 202 nucleotides
PfGW456L13_4188 - Nucleoside-binding outer membrane protein, at 4,699,539 to 4,700,285
_4188
PfGW456L13_4189 - Patatin, at 4,700,401 to 4,701,573
_4189
PfGW456L13_4190 - Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-), at 4,701,706 to 4,702,638
_4190
PfGW456L13_4191 - Septum site-determining protein MinC, at 4,702,748 to 4,703,494
_4191
PfGW456L13_4192 - Septum site-determining protein MinD, at 4,703,697 to 4,704,509
_4192
Group
Condition
PfGW456L13
_4188
PfGW456L13
_4189
PfGW456L13
_4190
PfGW456L13
_4191
PfGW456L13
_4192
carbon source
octanoate (C)
-0.3
-0.7
N.D.
N.D.
N.D.
stress
Aluminum chloride 2.5 mM
-0.2
-0.3
N.D.
N.D.
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.2
-0.2
N.D.
N.D.
N.D.
carbon source
L-Lactate (C)
-0.0
-0.3
N.D.
N.D.
N.D.
carbon source
L-Arabinose (C)
+0.1
-0.4
N.D.
N.D.
N.D.
stress
Lomefloxacin 0.0004 mM
+0.0
-0.3
N.D.
N.D.
N.D.
carbon source
L-Glutamine (C)
+0.0
-0.3
N.D.
N.D.
N.D.
nitrogen source
Putrescine (N)
+0.1
-0.3
N.D.
N.D.
N.D.
carbon source
Putrescine (C)
+0.3
-0.5
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
+0.2
-0.1
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
-0.2
+0.2
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
+0.2
-0.2
N.D.
N.D.
N.D.
carbon source
L-Phenylalanine (C)
+0.2
+0.2
N.D.
N.D.
N.D.
carbon source
D-Galactose (C)
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
Tween 20 (C)
+0.2
+0.2
N.D.
N.D.
N.D.
stress
Bacitracin 0.5 mg/ml
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
L-Asparagine (C)
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
D-Alanine (C)
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
D-Lactate (C)
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
Glycerol (C)
+0.2
+0.1
N.D.
N.D.
N.D.
nitrogen source
D-Alanine (N)
+0.2
+0.2
N.D.
N.D.
N.D.
nitrogen source
L-Citrulline (N)
+0.0
+0.4
N.D.
N.D.
N.D.
carbon source
D-Fructose (C)
+0.1
+0.3
N.D.
N.D.
N.D.
nitrogen source
L-Arginine (N)
+0.1
+0.3
N.D.
N.D.
N.D.
carbon source
L-Alanine (C)
+0.1
+0.3
N.D.
N.D.
N.D.
carbon source
succinate (C)
+0.2
+0.3
N.D.
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
+0.3
+0.2
N.D.
N.D.
N.D.
carbon source
casaminos (C)
+0.2
+0.3
N.D.
N.D.
N.D.
nitrogen source
nitrate (N)
+0.3
+0.3
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
-0.0
+0.6
N.D.
N.D.
N.D.
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