Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4108 and PfGW456L13_4109 are separated by 62 nucleotidesPfGW456L13_4109 and PfGW456L13_4110 are separated by 26 nucleotidesPfGW456L13_4110 and PfGW456L13_4111 are separated by 120 nucleotidesPfGW456L13_4111 and PfGW456L13_4112 are separated by 197 nucleotides PfGW456L13_4108 - CrfX protein, at 4,620,576 to 4,620,824 _4108 PfGW456L13_4109 - Magnesium and cobalt transport protein CorA, at 4,620,887 to 4,621,882 _4109 PfGW456L13_4110 - Ribonuclease E inhibitor RraA, at 4,621,909 to 4,622,400 _4110 PfGW456L13_4111 - Esterase/lipase/thioesterase family protein, at 4,622,521 to 4,623,510 _4111 PfGW456L13_4112 - Phosphoenolpyruvate synthase (EC 2.7.9.2), at 4,623,708 to 4,626,083 _4112
Group Condition PfGW456L13_4108 PfGW456L13_4109 PfGW456L13_4110 PfGW456L13_4111 PfGW456L13_4112
carbon source L-Lactate (C) -2.5 -0.3 -0.9 +0.3 -1.8
carbon source Tween 20 (C) -0.5 -0.2 -1.6 -0.3 -2.5
carbon source octanoate (C) -1.4 -0.7 -2.6 +2.0 -2.0
carbon source Trisodium citrate (C) -3.9 +0.2 -0.7 +0.1 -0.1
carbon source D,L-Lactate (C) -1.3 -0.5 -0.4 +0.2 -2.3
carbon source D-Fructose (C) -1.3 -0.7 -0.2 -0.0 -2.0
carbon source D-Fructose (C) -1.7 -0.4 -0.2 -0.3 -1.1
carbon source D-Lactate (C) -1.0 -0.1 -0.3 -0.2 -1.9
carbon source L-Tryptophan (C) -1.5 -0.2 -0.4 -0.1 -1.1
carbon source D-Galactose (C) -2.2 -0.2 -0.5 +0.0 +0.0
carbon source L-Tryptophan (C) -0.7 -0.6 +0.0 -0.1 -1.4
stress Lomefloxacin 0.0004 mM -1.4 -0.2 -0.7 -0.0 -0.0
carbon source D-Mannose (C) -0.3 -0.3 -0.3 -0.1 -1.3
carbon source L-Arabinose (C) -1.3 -0.8 -0.6 +0.2 +0.2
carbon source D-Gluconic Acid (C) -0.7 -0.5 -0.4 -0.2 -0.4
stress Bacitracin 1 mg/ml -1.0 +0.0 -0.5 +0.0 -0.6
nitrogen source NAG (N) -0.4 +0.1 -0.2 -0.4 -1.0
carbon source D-Lactate (C) +0.0 -0.1 -0.1 -0.2 -1.5
stress Vancomycin 0.5 mg/ml -0.8 +0.1 -0.2 -0.2 -0.8
carbon source L-Glutamine (C) -1.7 -0.1 +0.0 -0.1 +0.1
carbon source L-Alanine (C) -0.4 -0.2 +0.1 +0.1 -1.2
carbon source L-Asparagine (C) -1.0 +0.1 +0.2 +0.2 -0.8
carbon source Glycerol (C) -1.2 -0.4 -0.1 +0.4 -0.0
carbon source Putrescine (C) -1.1 +0.7 -0.3 -0.6 +0.0
carbon source D-Gluconic Acid (C) -1.6 +0.4 -0.0 +0.4 -0.1
carbon source D-Alanine (C) +0.2 -0.1 -0.0 +0.5 -1.2
carbon source L-Malic (C) +1.0 -0.5 -0.6 +0.1 -0.7
nitrogen source Gly-DL-Asp (N) -1.6 +0.1 +0.2 +0.2 +0.3
carbon source D-Serine (C) -0.7 -0.9 -0.1 +0.1 +2.5
carbon source D-Serine (C) +0.2 +0.2 -0.6 -0.3 +1.9
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