Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4098 and PfGW456L13_4099 are separated by 336 nucleotidesPfGW456L13_4099 and PfGW456L13_4100 are separated by 7 nucleotidesPfGW456L13_4100 and PfGW456L13_4101 are separated by 289 nucleotidesPfGW456L13_4101 and PfGW456L13_4102 overlap by 4 nucleotides PfGW456L13_4098 - Response regulator NasT, at 4,607,502 to 4,608,083 _4098 PfGW456L13_4099 - Nitrate/nitrite transporter, at 4,608,420 to 4,609,631 _4099 PfGW456L13_4100 - Serine/threonine protein kinase (EC 2.7.11.1), at 4,609,639 to 4,611,306 _4100 PfGW456L13_4101 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) (from data), at 4,611,596 to 4,614,049 _4101 PfGW456L13_4102 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 4,614,046 to 4,614,363 _4102
Group Condition PfGW456L13_4098 PfGW456L13_4099 PfGW456L13_4100 PfGW456L13_4101 PfGW456L13_4102
nitrogen source nitrate (N) -5.2 -0.4 +0.1 -4.3 N.D.
nitrogen source NAG (N) -0.5 -0.4 -0.0 -0.7 N.D.
carbon source L-Glutamine (C) -0.9 -0.3 +0.0 -0.2 N.D.
carbon source D,L-Lactate (C) -1.0 +0.0 -0.3 -0.0 N.D.
nitrogen source Uridine (N) -0.4 -0.4 +0.1 -0.4 N.D.
carbon source D-Fructose (C) -0.8 -0.5 +0.1 +0.1 N.D.
carbon source D-Galactose (C) -0.6 -0.2 -0.2 -0.0 N.D.
carbon source L-Histidine (C) -0.5 -0.3 -0.1 -0.1 N.D.
nitrogen source L-Threonine (N) -0.5 -0.0 +0.0 -0.4 N.D.
carbon source L-Arabinose (C) -0.6 -0.4 +0.1 +0.0 N.D.
carbon source L-Valine (C) -0.2 -0.5 -0.1 -0.0 N.D.
carbon source L-Alanine (C) -0.3 -0.3 -0.1 -0.0 N.D.
carbon source D-Fructose (C) -0.5 +0.0 -0.2 +0.0 N.D.
carbon source L-Malic (C) -0.7 +0.2 -0.2 +0.0 N.D.
carbon source L-Tryptophan (C) -0.6 +0.1 -0.1 -0.0 N.D.
carbon source D-Galactose (C) -0.6 -0.3 +0.3 +0.1 N.D.
carbon source L-Tryptophan (C) -0.6 -0.1 +0.1 +0.0 N.D.
carbon source Putrescine (C) -0.4 +0.2 -0.0 -0.3 N.D.
carbon source L-Malic (C) -0.7 -0.0 +0.2 +0.0 N.D.
nitrogen source Cytosine (N) -0.1 +0.2 -0.0 -0.4 N.D.
stress nitrate 200 mM -0.4 -0.1 +0.0 +0.2 N.D.
carbon source a-Ketoglutaric (C) +0.3 -0.3 -0.2 -0.1 N.D.
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.3 -0.1 -0.2 -0.2 N.D.
carbon source D-Gluconic Acid (C) -0.2 +0.5 -0.3 +0.1 N.D.
carbon source L-Arabinose (C) +0.2 +0.1 -0.3 +0.2 N.D.
nitrogen source Gly-Glu (N) +0.3 +0.3 -0.1 -0.1 N.D.
stress Vancomycin 0.25 mg/ml +0.4 -0.2 +0.2 -0.1 N.D.
carbon source Trisodium citrate (C) +0.7 -0.3 -0.0 +0.1 N.D.
stress Bacitracin 1 mg/ml +0.4 +0.0 +0.3 -0.0 N.D.
nitrogen source Glycine (N) +0.4 +0.3 +0.1 -0.0 N.D.
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