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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4074 and PfGW456L13_4075 are separated by 79 nucleotides
PfGW456L13_4075 and PfGW456L13_4076 are separated by 277 nucleotides
PfGW456L13_4076 and PfGW456L13_4077 are separated by 67 nucleotides
PfGW456L13_4077 and PfGW456L13_4078 are separated by 123 nucleotides
PfGW456L13_4074 - Recombination protein RecR, at 4,572,791 to 4,573,393
_4074
PfGW456L13_4075 - Putative oxidoreductase YncB, at 4,573,473 to 4,574,504
_4075
PfGW456L13_4076 - FIG000557: hypothetical protein co-occurring with RecR, at 4,574,782 to 4,575,120
_4076
PfGW456L13_4077 - DNA polymerase III subunits gamma and tau (EC 2.7.7.7), at 4,575,188 to 4,577,269
_4077
PfGW456L13_4078 - FIG00953368: hypothetical protein, at 4,577,393 to 4,578,190
_4078
Group
Condition
PfGW456L13
_4074
PfGW456L13
_4075
PfGW456L13
_4076
PfGW456L13
_4077
PfGW456L13
_4078
stress
Cisplatin 0.0125 mg/ml
-1.3
+0.0
N.D.
N.D.
+0.0
stress
nitrate 200 mM
-1.1
-0.0
N.D.
N.D.
-0.1
carbon source
D,L-Lactate (C)
-0.4
-0.1
N.D.
N.D.
-0.4
carbon source
D-Galactose (C)
-0.6
-0.1
N.D.
N.D.
-0.2
carbon source
D-Mannose (C)
-0.0
-0.1
N.D.
N.D.
-0.7
carbon source
Putrescine (C)
-0.8
+0.1
N.D.
N.D.
-0.0
carbon source
L-Alanine (C)
-0.4
+0.2
N.D.
N.D.
-0.5
carbon source
L-Arabinose (C)
-0.1
+0.1
N.D.
N.D.
-0.6
carbon source
L-Histidine (C)
-0.6
+0.2
N.D.
N.D.
-0.2
stress
nitrite 10 mM
-0.6
+0.1
N.D.
N.D.
-0.0
carbon source
D-Lactate (C)
+0.1
-0.1
N.D.
N.D.
-0.6
carbon source
L-Asparagine (C)
-0.1
+0.1
N.D.
N.D.
-0.6
stress
Thallium(I) acetate 0.008 mg/ml
-0.6
+0.1
N.D.
N.D.
-0.1
stress
Zinc 1 mM
-0.3
+0.1
N.D.
N.D.
-0.3
carbon source
L-Phenylalanine (C)
-0.7
+0.2
N.D.
N.D.
+0.1
carbon source
D-Fructose (C)
+0.1
+0.1
N.D.
N.D.
-0.6
stress
Chloride 400 mM
-0.5
-0.1
N.D.
N.D.
+0.1
stress
Lomefloxacin 0.0004 mM
-0.6
+0.0
N.D.
N.D.
+0.3
stress
Thallium(I) acetate 0.004 mg/ml
-0.4
+0.2
N.D.
N.D.
+0.0
stress
Vancomycin 0.25 mg/ml
-0.5
+0.1
N.D.
N.D.
+0.2
stress
Aluminum chloride 5 mM
-0.4
+0.1
N.D.
N.D.
+0.2
stress
Aluminum chloride 2.5 mM
-0.4
+0.2
N.D.
N.D.
+0.1
stress
Benzethonium chloride 0.0125 mM
-0.4
+0.0
N.D.
N.D.
+0.3
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.2
-0.1
N.D.
N.D.
+0.3
carbon source
Glycerol (C)
+0.1
+0.3
N.D.
N.D.
-0.4
carbon source
a-Ketoglutaric (C)
-0.4
+0.3
N.D.
N.D.
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
-0.3
+0.1
N.D.
N.D.
+0.4
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
-0.1
N.D.
N.D.
+0.4
nitrogen source
Gly-DL-Asp (N)
+0.3
+0.0
N.D.
N.D.
+0.3
carbon source
octanoate (C)
+0.1
+0.4
N.D.
N.D.
+0.3
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