Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_4040 and PfGW456L13_4041 are separated by 29 nucleotidesPfGW456L13_4041 and PfGW456L13_4042 are separated by 619 nucleotidesPfGW456L13_4042 and PfGW456L13_4043 are separated by 122 nucleotidesPfGW456L13_4043 and PfGW456L13_4044 are separated by 183 nucleotides PfGW456L13_4040 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 4,532,353 to 4,533,528 _4040 PfGW456L13_4041 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 4,533,558 to 4,535,705 _4041 PfGW456L13_4042 - FIG00953628: hypothetical protein, at 4,536,325 to 4,536,744 _4042 PfGW456L13_4043 - Universal stress protein family COG0589, at 4,536,867 to 4,537,307 _4043 PfGW456L13_4044 - COG0488: ATPase components of ABC transporters with duplicated ATPase domains, at 4,537,491 to 4,539,410 _4044
Group Condition PfGW456L13_4040 PfGW456L13_4041 PfGW456L13_4042 PfGW456L13_4043 PfGW456L13_4044
carbon source Tween 20 (C) -4.4 -4.2 -0.5 +0.0 -0.2
carbon source L-Tryptophan (C) -3.1 -3.5 -1.4 -0.1 +0.1
carbon source L-Tryptophan (C) -0.5 -4.0 -1.7 -0.7 +0.2
carbon source Trisodium citrate (C) -2.1 -2.4 +0.1 -1.0 +0.4
carbon source octanoate (C) -2.7 -1.0 -0.6 -0.6 +0.3
carbon source L-Histidine (C) -1.9 -2.7 +0.1 +0.1 -0.1
carbon source L-Phenylalanine (C) -0.2 -1.9 -1.8 -0.2 -0.0
carbon source L-Phenylalanine (C) -0.9 -1.7 -1.0 -0.6 +0.1
carbon source L-Malic (C) +0.1 -0.0 -4.0 +0.1 -0.1
carbon source D-Mannose (C) -0.9 -1.9 -1.0 +0.1 -0.2
carbon source L-Valine (C) -0.8 -3.1 +0.1 -0.2 +0.2
nitrogen source Putrescine (N) -1.4 -1.3 -0.7 -0.3 +0.0
nitrogen source L-Citrulline (N) -0.8 -1.0 -1.4 -0.0 -0.2
carbon source Putrescine (C) -0.9 -2.9 -0.7 +0.8 +0.2
carbon source Glycerol (C) -0.5 -2.9 -0.4 +0.5 +0.0
carbon source D-Serine (C) -1.1 -2.4 +0.2 +0.0 +0.2
carbon source L-Histidine (C) -1.0 -1.6 -0.2 -0.4 +0.2
carbon source a-Ketoglutaric (C) +1.2 -1.2 -3.1 +0.2 +0.0
control LB control -0.8 -0.4 -1.8 +0.4 -0.0
carbon source L-Arabinose (C) -0.9 -2.0 +0.7 -0.7 +0.3
carbon source D-Fructose (C) +0.5 -2.1 -1.0 -0.7 +0.8
control LB control -1.4 -1.1 -0.5 +0.7 -0.1
carbon source D-Glucose (C) -0.4 -0.6 -2.3 +0.6 +0.6
carbon source L-Alanine (C) -0.6 -1.6 +0.5 -0.4 +0.1
stress Bacitracin 0.5 mg/ml +1.1 +0.5 -1.8 -0.4 +0.1
stress Bacitracin 1 mg/ml +1.1 +1.3 -2.6 -0.3 +0.2
stress Vancomycin 0.5 mg/ml +1.0 +0.5 -1.0 -0.8 +0.5
stress Vancomycin 0.125 mg/ml +1.1 +1.1 -1.6 -0.4 +0.1
carbon source a-Ketoglutaric (C) +1.1 +0.9 -1.3 +0.2 +0.3
stress D-Cycloserine 0.125 mg/ml +1.1 +1.1 -0.2 -0.3 +0.2
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