Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 116 experiments or choose conditions or try the comparative fitness browser

500 ntPfGW456L13_4038 and PfGW456L13_4039 are separated by 114 nucleotidesPfGW456L13_4039 and PfGW456L13_4040 are separated by 95 nucleotidesPfGW456L13_4040 and PfGW456L13_4041 are separated by 29 nucleotidesPfGW456L13_4041 and PfGW456L13_4042 are separated by 619 nucleotides PfGW456L13_4038 - DNA topoisomerase I (EC 5.99.1.2), at 4,529,279 to 4,531,906 _4038 PfGW456L13_4039 - FIG00953423: hypothetical protein, at 4,532,021 to 4,532,257 _4039 PfGW456L13_4040 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 4,532,353 to 4,533,528 _4040 PfGW456L13_4041 - Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3), at 4,533,558 to 4,535,705 _4041 PfGW456L13_4042 - FIG00953628: hypothetical protein, at 4,536,325 to 4,536,744 _4042
Group Condition PfGW456L13_4038 PfGW456L13_4039 PfGW456L13_4040 PfGW456L13_4041 PfGW456L13_4042
carbon source L-Tryptophan (C) -3.0 +0.5 -3.1 -3.5 -1.4
carbon source Tween 20 (C) -1.2 +0.0 -4.4 -4.2 -0.5
carbon source L-Tryptophan (C) -3.4 +0.2 -0.5 -4.0 -1.7
carbon source Trisodium citrate (C) -4.8 -0.0 -2.1 -2.4 +0.1
carbon source L-Histidine (C) -3.4 +0.1 -1.9 -2.7 +0.1
carbon source D-Glucose (C) -3.6 -0.2 -0.4 -0.6 -2.3
carbon source D-Fructose (C) -4.4 +0.1 +0.5 -2.1 -1.0
control LB control -3.0 -0.1 -0.0 -0.8 -1.9
nitrogen source L-Citrulline (N) -2.6 +0.1 -0.8 -1.0 -1.4
carbon source L-Glutamine (C) -3.6 +0.0 -0.1 -2.3 +0.4
carbon source L-Valine (C) -1.7 -0.0 -0.8 -3.1 +0.1
control LB control -2.1 -0.1 -1.4 -1.1 -0.5
control LB control -1.9 -0.1 -0.8 -0.4 -1.8
carbon source a-Ketoglutaric (C) -1.6 -0.1 +1.2 -1.2 -3.1
nitrogen source L-Lysine (N) -3.8 -0.1 +0.1 -0.6 -0.3
carbon source Putrescine (C) -0.5 +0.6 -0.9 -2.9 -0.7
carbon source Glycerol (C) -0.5 +0.2 -0.5 -2.9 -0.4
stress Bacitracin 1 mg/ml -3.7 -0.2 +1.1 +1.3 -2.6
carbon source octanoate (C) -2.0 +2.3 -2.7 -1.0 -0.6
nitrogen source L-Asparagine (N) -3.1 +0.1 -0.6 +0.6 -1.0
carbon source D-Serine (C) -0.9 +0.5 -1.1 -2.4 +0.2
carbon source L-Arabinose (C) -1.7 +0.3 -0.9 -2.0 +0.7
stress Bacitracin 0.5 mg/ml -2.5 -0.2 +1.1 +0.5 -1.8
stress Vancomycin 0.5 mg/ml -2.8 -0.1 +1.0 +0.5 -1.0
stress Vancomycin 0.25 mg/ml -4.1 +0.1 +1.2 +1.3 -0.1
carbon source D-Gluconic Acid (C) -3.6 +0.4 +0.8 +0.8 -0.1
stress Vancomycin 0.125 mg/ml -2.4 +0.2 +1.1 +1.1 -1.6
carbon source a-Ketoglutaric (C) -1.9 +0.2 +1.1 +0.9 -1.3
stress D-Cycloserine 0.125 mg/ml -2.3 -0.1 +1.1 +1.1 -0.2
stress Paraquat dichloride 0.032 mg/ml +2.1 +0.1 -0.2 -1.4 -0.8
remove
PfGW456L13_4038
plot
remove
PfGW456L13_4039
plot
remove
PfGW456L13_4040
remove
PfGW456L13_4041
plot
remove
PfGW456L13_4042
plot