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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_4018 and PfGW456L13_4019 are separated by 106 nucleotides
PfGW456L13_4019 and PfGW456L13_4020 are separated by 66 nucleotides
PfGW456L13_4020 and PfGW456L13_4021 overlap by 8 nucleotides
PfGW456L13_4021 and PfGW456L13_4022 are separated by 268 nucleotides
PfGW456L13_4018 - Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-), at 4,506,332 to 4,507,681
_4018
PfGW456L13_4019 - Lipoprotein releasing system transmembrane protein LolE, at 4,507,788 to 4,509,032
_4019
PfGW456L13_4020 - Lipoprotein releasing system ATP-binding protein LolD, at 4,509,099 to 4,509,797
_4020
PfGW456L13_4021 - Lipoprotein releasing system transmembrane protein LolC, at 4,509,790 to 4,510,974
_4021
PfGW456L13_4022 - FIG00953243: hypothetical protein, at 4,511,243 to 4,511,716
_4022
Group
Condition
PfGW456L13
_4018
PfGW456L13
_4019
PfGW456L13
_4020
PfGW456L13
_4021
PfGW456L13
_4022
nitrogen source
L-Histidine (N)
+0.0
N.D.
N.D.
N.D.
-0.9
lb
LB
-0.2
N.D.
N.D.
N.D.
-0.6
stress
Nickel (II) chloride 1 mM
-0.1
N.D.
N.D.
N.D.
-0.7
carbon source
L-Tryptophan (C)
+0.2
N.D.
N.D.
N.D.
-0.9
stress
Chloride 400 mM
+0.0
N.D.
N.D.
N.D.
-0.7
nitrogen source
L-Lysine (N)
-0.3
N.D.
N.D.
N.D.
-0.4
carbon source
L-Tryptophan (C)
+0.1
N.D.
N.D.
N.D.
-0.8
carbon source
Putrescine (C)
-0.3
N.D.
N.D.
N.D.
-0.4
stress
Fusidic 0.08 mg/ml
+0.1
N.D.
N.D.
N.D.
-0.7
carbon source
octanoate (C)
-0.6
N.D.
N.D.
N.D.
+0.7
nitrogen source
L-Tryptophan (N)
-0.2
N.D.
N.D.
N.D.
+0.5
carbon source
L-Glutamine (C)
-0.1
N.D.
N.D.
N.D.
+0.6
carbon source
L-Histidine (C)
-0.3
N.D.
N.D.
N.D.
+1.0
nitrogen source
Putrescine (N)
+0.1
N.D.
N.D.
N.D.
+0.6
carbon source
D-Mannose (C)
+0.1
N.D.
N.D.
N.D.
+0.6
stress
nitrate 200 mM
+0.4
N.D.
N.D.
N.D.
+0.3
carbon source
D-Alanine (C)
+0.1
N.D.
N.D.
N.D.
+0.7
carbon source
casaminos (C)
+0.1
N.D.
N.D.
N.D.
+0.6
carbon source
D-Galactose (C)
+0.0
N.D.
N.D.
N.D.
+0.7
carbon source
D-Fructose (C)
-0.1
N.D.
N.D.
N.D.
+0.8
carbon source
L-Lactate (C)
+0.2
N.D.
N.D.
N.D.
+0.6
carbon source
a-Ketoglutaric (C)
+0.6
N.D.
N.D.
N.D.
+0.2
nitrogen source
Gly-DL-Asp (N)
+0.2
N.D.
N.D.
N.D.
+0.6
carbon source
D-Fructose (C)
+0.6
N.D.
N.D.
N.D.
+0.3
carbon source
D-Serine (C)
+0.2
N.D.
N.D.
N.D.
+0.8
carbon source
D,L-Lactate (C)
-0.1
N.D.
N.D.
N.D.
+1.0
carbon source
a-Ketoglutaric (C)
+0.3
N.D.
N.D.
N.D.
+0.7
carbon source
Glycerol (C)
+0.3
N.D.
N.D.
N.D.
+0.7
carbon source
D-Glucose (C)
+0.0
N.D.
N.D.
N.D.
+1.2
carbon source
succinate (C)
+0.1
N.D.
N.D.
N.D.
+1.4
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