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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3986 and PfGW456L13_3987 are separated by 218 nucleotides
PfGW456L13_3987 and PfGW456L13_3988 are separated by 54 nucleotides
PfGW456L13_3988 and PfGW456L13_3989 are separated by 1031 nucleotides
PfGW456L13_3989 and PfGW456L13_3990 are separated by 1011 nucleotides
PfGW456L13_3986 - Shufflon-specific DNA recombinase, at 4,471,841 to 4,472,137
_3986
PfGW456L13_3987 - tRNA dihydrouridine synthase A, at 4,472,356 to 4,473,249
_3987
PfGW456L13_3988 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 4,473,304 to 4,474,098
_3988
PfGW456L13_3989 - FIG00964275: hypothetical protein, at 4,475,130 to 4,475,402
_3989
PfGW456L13_3990 - Response regulator receiver domain protein (CheY), at 4,476,414 to 4,476,896
_3990
Group
Condition
PfGW456L13
_3986
PfGW456L13
_3987
PfGW456L13
_3988
PfGW456L13
_3989
PfGW456L13
_3990
stress
Lomefloxacin 0.0004 mM
-0.2
-0.4
+0.0
-1.7
-2.4
nitrogen source
L-Glutamine (N)
+0.1
+0.0
+0.1
-1.2
-2.0
nitrogen source
L-Glutamic (N)
+0.1
-0.0
+0.0
-1.4
-1.6
stress
Vancomycin 0.5 mg/ml
+0.4
-0.5
+0.4
-1.5
-1.4
nitrogen source
L-Asparagine (N)
+0.1
-0.1
-0.1
-1.0
-1.2
carbon source
D-Glucose (C)
+0.4
-0.1
-0.1
-0.9
-1.6
carbon source
D-Fructose (C)
-0.4
+0.2
+0.1
-1.1
-1.0
nitrogen source
Ammonium chloride (N)
+0.1
-0.1
+0.1
-1.3
-0.9
nitrogen source
L-Proline (N)
+0.3
+0.1
-0.0
-0.7
-1.6
carbon source
L-Glutamine (C)
+0.3
+0.0
+0.1
-0.8
-1.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
-0.1
-0.7
+1.4
+0.5
lb
LB
-0.8
-0.0
+0.2
+1.0
+0.8
carbon source
D-Gluconic Acid (C)
-0.3
-0.3
+0.2
+0.8
+0.9
stress
nitrite 10 mM
-0.2
+0.0
+0.0
+0.7
+1.5
carbon source
L-Valine (C)
+0.2
-0.1
+0.5
+0.2
+1.6
stress
Thallium(I) acetate 0.002 mg/ml
-0.0
+0.0
-0.0
+0.9
+1.7
carbon source
Trisodium citrate (C)
+0.2
-0.1
+0.3
+0.7
+1.5
stress
Bacitracin 0.5 mg/ml
+0.4
-0.2
-0.1
+1.0
+1.7
stress
Fusidic 0.03 mg/ml
-0.1
-0.1
-0.0
+1.0
+2.1
stress
D-Cycloserine 0.125 mg/ml
+0.3
-0.1
+0.0
+0.8
+1.8
stress
nitrate 200 mM
+0.5
-0.2
+0.4
+1.1
+1.6
stress
nitrite 5 mM
+0.1
-0.1
-0.0
+1.6
+2.1
stress
Aluminum chloride 5 mM
+0.0
-0.0
+0.2
+1.6
+1.7
stress
Paraquat dichloride 0.032 mg/ml
-0.0
-0.0
+0.2
+1.3
+2.3
carbon source
octanoate (C)
-0.3
+0.7
-0.0
+2.5
+1.1
stress
Cephalothin 3 mg/ml
+0.3
+0.0
+0.3
+0.8
+2.7
carbon source
L-Valine (C)
+0.2
+0.1
+0.4
+2.0
+1.5
lb
LB
+0.2
+0.2
+0.0
+1.6
+2.5
stress
Chloride 400 mM
+0.5
-0.0
+0.4
+1.9
+2.2
stress
Aluminum chloride 2.5 mM
+0.2
+0.3
+0.5
+1.7
+2.7
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