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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3950 and PfGW456L13_3951 are separated by 46 nucleotides
PfGW456L13_3951 and PfGW456L13_3952 are separated by 132 nucleotides
PfGW456L13_3952 and PfGW456L13_3953 are separated by 231 nucleotides
PfGW456L13_3953 and PfGW456L13_3954 are separated by 49 nucleotides
PfGW456L13_3950 - Sensory box/GGDEF family protein, at 4,429,756 to 4,433,034
_3950
PfGW456L13_3951 - 16 kDa heat shock protein A, at 4,433,081 to 4,433,527
_3951
PfGW456L13_3952 - tRNA-dihydrouridine synthase C (EC 1.-.-.-), at 4,433,660 to 4,434,589
_3952
PfGW456L13_3953 - FIG002571: 4-hydroxybenzoyl-CoA thioesterase domain protein, at 4,434,821 to 4,435,258
_3953
PfGW456L13_3954 - Probable hydrolase, at 4,435,308 to 4,436,141
_3954
Group
Condition
PfGW456L13
_3950
PfGW456L13
_3951
PfGW456L13
_3952
PfGW456L13
_3953
PfGW456L13
_3954
control
LB control
-0.1
-0.3
-0.3
-0.3
-0.1
carbon source
a-Ketoglutaric (C)
-0.3
+0.0
+0.0
-0.7
-0.1
control
LB control
+0.0
-0.6
-0.3
-0.0
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
-0.1
+0.2
+0.2
-1.0
stress
Bacitracin 1 mg/ml
-0.0
-0.1
-0.2
+0.4
-0.9
carbon source
D-Fructose (C)
-0.2
-0.1
+0.3
-0.7
-0.1
carbon source
D,L-Lactate (C)
-0.0
+0.0
-0.2
+0.1
-0.6
carbon source
L-Glutamine (C)
-0.1
-0.0
-0.2
+0.3
-0.7
control
LB control
+0.1
-0.4
+0.2
-0.4
+0.0
carbon source
L-Valine (C)
+0.2
+0.3
-0.1
+0.1
-1.0
nitrogen source
Gly-DL-Asp (N)
-0.1
-0.3
-0.2
+0.4
-0.4
carbon source
succinate (C)
+0.1
+0.3
-0.1
-0.6
-0.1
stress
Aluminum chloride 5 mM
-0.3
+0.1
+0.4
+0.2
-0.5
carbon source
D-Fructose (C)
-0.2
+0.1
+0.2
+0.5
-0.7
stress
Vancomycin 0.5 mg/ml
+0.0
-0.2
+0.2
+0.4
-0.3
carbon source
L-Arabinose (C)
-0.1
+0.2
+0.5
+0.3
-0.6
carbon source
L-Malic (C)
-0.0
+0.0
+0.4
+0.5
-0.6
carbon source
D-Gluconic Acid (C)
+0.1
+0.2
+0.1
+0.5
-0.4
nitrogen source
Ammonium chloride (N)
-0.2
+0.0
-0.1
+0.4
+0.4
stress
Fusidic 0.08 mg/ml
+0.1
-0.2
+0.2
+0.4
+0.1
stress
D-Cycloserine 0.125 mg/ml
+0.0
-0.2
+0.2
+0.2
+0.3
carbon source
D-Lactate (C)
-0.4
-0.1
+0.7
-0.0
+0.4
nitrogen source
nitrate (N)
-0.0
-0.2
+0.2
+0.1
+0.6
nitrogen source
L-Threonine (N)
-0.1
-0.1
+0.3
-0.2
+0.7
carbon source
D-Alanine (C)
+0.1
+0.1
+0.2
-0.3
+0.7
stress
Lomefloxacin 0.0004 mM
-0.3
-0.1
+0.3
+0.8
+0.2
carbon source
D-Glucose (C)
+0.2
-0.1
+0.3
-0.1
+0.7
carbon source
D-Gluconic Acid (C)
+0.0
-0.1
+0.2
+0.8
+0.2
carbon source
L-Arabinose (C)
+0.2
+0.0
-0.0
+0.4
+0.6
carbon source
octanoate (C)
+0.3
+0.0
+0.5
+0.8
-0.2
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