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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_3935 and PfGW456L13_3936 are separated by 41 nucleotides
PfGW456L13_3936 and PfGW456L13_3937 are separated by 98 nucleotides
PfGW456L13_3937 and PfGW456L13_3938 overlap by 17 nucleotides
PfGW456L13_3938 and PfGW456L13_3939 overlap by 4 nucleotides
PfGW456L13_3935 - Amidophosphoribosyltransferase (EC 2.4.2.14), at 4,412,202 to 4,413,707
_3935
PfGW456L13_3936 - Colicin V production protein, at 4,413,749 to 4,414,309
_3936
PfGW456L13_3937 - DedD protein, at 4,414,408 to 4,415,076
_3937
PfGW456L13_3938 - Dihydrofolate synthase (EC 6.3.2.12) @ Folylpolyglutamate synthase (EC 6.3.2.17), at 4,415,060 to 4,416,367
_3938
PfGW456L13_3939 - Acetyl-coenzyme A carboxyl transferase beta chain (EC 6.4.1.2), at 4,416,364 to 4,417,284
_3939
Group
Condition
PfGW456L13
_3935
PfGW456L13
_3936
PfGW456L13
_3937
PfGW456L13
_3938
PfGW456L13
_3939
carbon source
octanoate (C)
N.D.
-2.5
-0.7
N.D.
N.D.
stress
nitrate 200 mM
N.D.
-1.0
-1.5
N.D.
N.D.
carbon source
L-Histidine (C)
N.D.
-2.3
+0.3
N.D.
N.D.
nitrogen source
L-Tryptophan (N)
N.D.
-2.3
+0.2
N.D.
N.D.
carbon source
L-Glutamine (C)
N.D.
-1.1
-0.8
N.D.
N.D.
control
LB control
N.D.
-0.2
-1.7
N.D.
N.D.
carbon source
D-Glucose (C)
N.D.
-0.9
-0.9
N.D.
N.D.
carbon source
L-Phenylalanine (C)
N.D.
-0.8
-1.0
N.D.
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
-1.7
-0.1
N.D.
N.D.
nitrogen source
L-Serine (N)
N.D.
-0.8
-0.9
N.D.
N.D.
control
LB control
N.D.
-0.4
-1.2
N.D.
N.D.
stress
Vancomycin 0.25 mg/ml
N.D.
-2.5
+1.0
N.D.
N.D.
nitrogen source
L-Glutamine (N)
N.D.
-1.6
+0.1
N.D.
N.D.
stress
Zinc 1 mM
N.D.
-0.3
-1.1
N.D.
N.D.
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
-0.8
-0.6
N.D.
N.D.
stress
Vancomycin 0.5 mg/ml
N.D.
-2.7
+1.2
N.D.
N.D.
carbon source
Glycerol (C)
N.D.
-1.8
+0.4
N.D.
N.D.
carbon source
L-Tryptophan (C)
N.D.
-1.1
-0.2
N.D.
N.D.
nitrogen source
L-Glutamic (N)
N.D.
-1.5
+0.2
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-1.4
+0.2
N.D.
N.D.
nitrogen source
L-Arginine (N)
N.D.
-1.2
+0.2
N.D.
N.D.
carbon source
D-Fructose (C)
N.D.
-1.4
+0.4
N.D.
N.D.
nitrogen source
L-Proline (N)
N.D.
-1.2
+0.4
N.D.
N.D.
carbon source
D,L-Lactate (C)
N.D.
-0.8
+0.5
N.D.
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
-1.3
+1.1
N.D.
N.D.
nitrogen source
L-Histidine (N)
N.D.
-1.0
+0.7
N.D.
N.D.
carbon source
D-Lactate (C)
N.D.
-0.8
+0.6
N.D.
N.D.
stress
Bacitracin 1 mg/ml
N.D.
-0.7
+0.7
N.D.
N.D.
stress
Vancomycin 0.125 mg/ml
N.D.
-1.1
+1.2
N.D.
N.D.
stress
Bacitracin 0.5 mg/ml
N.D.
-0.7
+0.9
N.D.
N.D.
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