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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_3898 and PfGW456L13_3899 are separated by 60 nucleotides
PfGW456L13_3899 and PfGW456L13_3900 are separated by 119 nucleotides
PfGW456L13_3900 and PfGW456L13_3901 are separated by 375 nucleotides
PfGW456L13_3901 and PfGW456L13_3902 are separated by 292 nucleotides
PfGW456L13_3898 - LSU ribosomal protein L35p, at 4,374,648 to 4,374,842
_3898
PfGW456L13_3899 - Translation initiation factor 3, at 4,374,903 to 4,375,334
_3899
PfGW456L13_3900 - Threonyl-tRNA synthetase (EC 6.1.1.3), at 4,375,454 to 4,377,376
_3900
PfGW456L13_3901 - FIG00953292: hypothetical protein, at 4,377,752 to 4,378,054
_3901
PfGW456L13_3902 - Cold shock protein CspG, at 4,378,347 to 4,378,559
_3902
Group
Condition
PfGW456L13
_3898
PfGW456L13
_3899
PfGW456L13
_3900
PfGW456L13
_3901
PfGW456L13
_3902
carbon source
octanoate (C)
N.D.
N.D.
N.D.
-0.7
N.D.
carbon source
L-Glutamine (C)
N.D.
N.D.
N.D.
-0.6
N.D.
stress
Vancomycin 0.5 mg/ml
N.D.
N.D.
N.D.
-0.5
N.D.
nitrogen source
D-Serine (N)
N.D.
N.D.
N.D.
-0.5
N.D.
carbon source
L-Glutamine (C)
N.D.
N.D.
N.D.
-0.4
N.D.
carbon source
D-Serine (C)
N.D.
N.D.
N.D.
-0.4
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
L-Phenylalanine (C)
N.D.
N.D.
N.D.
-0.3
N.D.
carbon source
Glycerol (C)
N.D.
N.D.
N.D.
-0.3
N.D.
stress
nitrate 200 mM
N.D.
N.D.
N.D.
+0.3
N.D.
nitrogen source
D-Alanine (N)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
L-Alanine (C)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
L-Malic (C)
N.D.
N.D.
N.D.
+0.3
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
L-Valine (C)
N.D.
N.D.
N.D.
+0.3
N.D.
nitrogen source
L-Serine (N)
N.D.
N.D.
N.D.
+0.3
N.D.
nitrogen source
L-Alanine (N)
N.D.
N.D.
N.D.
+0.3
N.D.
carbon source
D-Lactate (C)
N.D.
N.D.
N.D.
+0.3
N.D.
stress
Thallium(I) acetate 0.004 mg/ml
N.D.
N.D.
N.D.
+0.3
N.D.
nitrogen source
L-Phenylalanine (N)
N.D.
N.D.
N.D.
+0.4
N.D.
carbon source
L-Histidine (C)
N.D.
N.D.
N.D.
+0.4
N.D.
nitrogen source
L-Leucine (N)
N.D.
N.D.
N.D.
+0.4
N.D.
nitrogen source
L-Valine (N)
N.D.
N.D.
N.D.
+0.5
N.D.
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
+0.5
N.D.
nitrogen source
nitrate (N)
N.D.
N.D.
N.D.
+0.5
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
+0.5
N.D.
carbon source
a-Ketoglutaric (C)
N.D.
N.D.
N.D.
+0.6
N.D.
carbon source
L-Lactate (C)
N.D.
N.D.
N.D.
+0.7
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
N.D.
N.D.
+0.7
N.D.
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.8
N.D.
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