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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3828 and PfGW456L13_3829 are separated by 58 nucleotides
PfGW456L13_3829 and PfGW456L13_3830 overlap by 4 nucleotides
PfGW456L13_3830 and PfGW456L13_3831 are separated by 167 nucleotides
PfGW456L13_3831 and PfGW456L13_3832 are separated by 285 nucleotides
PfGW456L13_3828 - hypothetical protein, at 4,294,990 to 4,295,142
_3828
PfGW456L13_3829 - FIG00958502: hypothetical protein, at 4,295,201 to 4,295,515
_3829
PfGW456L13_3830 - FIG00955248: hypothetical protein, at 4,295,512 to 4,296,210
_3830
PfGW456L13_3831 - FOG: PAS/PAC domain, at 4,296,378 to 4,297,313
_3831
PfGW456L13_3832 - 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7), at 4,297,599 to 4,298,474
_3832
Group
Condition
PfGW456L13
_3828
PfGW456L13
_3829
PfGW456L13
_3830
PfGW456L13
_3831
PfGW456L13
_3832
carbon source
L-Lactate (C)
N.D.
-0.3
-0.6
-0.5
-0.5
carbon source
Putrescine (C)
N.D.
-0.2
-0.2
-0.7
-0.1
stress
Lomefloxacin 0.0004 mM
N.D.
+0.5
-1.2
+0.3
-0.8
stress
Cephalothin 3 mg/ml
N.D.
-0.2
-0.3
-0.1
-0.4
stress
Bacitracin 1 mg/ml
N.D.
-0.2
-0.1
-0.1
-0.5
carbon source
L-Tryptophan (C)
N.D.
-0.7
-0.0
-0.2
-0.0
carbon source
Glycerol (C)
N.D.
-0.3
+0.1
-0.5
-0.2
stress
A22 0.04 mg/ml
N.D.
+0.1
-0.4
-0.1
-0.4
stress
Vancomycin 0.125 mg/ml
N.D.
+0.2
-0.6
-0.1
-0.1
carbon source
octanoate (C)
N.D.
+0.3
-0.2
+0.3
-0.9
carbon source
L-Glutamine (C)
N.D.
-0.7
+0.3
-0.1
-0.1
nitrogen source
L-Lysine (N)
N.D.
-0.0
-0.4
-0.3
+0.3
carbon source
D-Lactate (C)
N.D.
-0.1
+0.5
-0.7
+0.0
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
N.D.
+0.4
-0.1
-0.2
-0.4
carbon source
L-Arabinose (C)
N.D.
-0.6
+0.4
+0.1
-0.0
carbon source
Trisodium citrate (C)
N.D.
-0.3
+0.4
-0.2
+0.0
carbon source
a-Ketoglutaric (C)
N.D.
+0.5
-0.1
-0.6
+0.1
stress
Thallium(I) acetate 0.004 mg/ml
N.D.
-0.2
+0.5
-0.4
+0.0
carbon source
D-Fructose (C)
N.D.
+0.2
+0.4
-0.1
-0.2
carbon source
D-Glucose (C)
N.D.
-0.0
-0.3
+0.7
-0.1
stress
Chloride 400 mM
N.D.
-0.5
+0.2
+0.5
+0.2
carbon source
D-Gluconic Acid (C)
N.D.
+0.1
+0.6
+0.2
-0.2
nitrogen source
Ammonium chloride (N)
N.D.
+0.3
+0.3
-0.1
+0.3
stress
Aluminum chloride 5 mM
N.D.
+0.1
-0.1
+0.7
+0.1
nitrogen source
L-Histidine (N)
N.D.
+0.1
+0.3
-0.1
+0.6
nitrogen source
L-Threonine (N)
N.D.
+0.3
+0.1
+0.3
+0.4
carbon source
Glycerol (C)
N.D.
+0.2
+0.8
-0.1
+0.1
carbon source
D-Fructose (C)
N.D.
+0.3
+0.2
+0.1
+0.5
carbon source
L-Malic (C)
N.D.
+0.1
+0.4
-0.0
+0.7
carbon source
L-Tryptophan (C)
N.D.
+0.4
+0.6
+0.4
+0.1
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