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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_3805 and PfGW456L13_3806 are separated by 25 nucleotides
PfGW456L13_3806 and PfGW456L13_3807 are separated by 138 nucleotides
PfGW456L13_3807 and PfGW456L13_3808 are separated by 314 nucleotides
PfGW456L13_3808 and PfGW456L13_3809 are separated by 95 nucleotides
PfGW456L13_3805 - Transcriptional regulator, MerR family, at 4,276,906 to 4,277,460
_3805
PfGW456L13_3806 - Nucleoside-diphosphate-sugar epimerases, at 4,277,486 to 4,278,775
_3806
PfGW456L13_3807 - NADH dehydrogenase (EC 1.6.99.3), at 4,278,914 to 4,280,116
_3807
PfGW456L13_3808 - Predicted transcriptional regulator of NADH dehydrogenase, Rrf2 family, at 4,280,431 to 4,280,991
_3808
PfGW456L13_3809 - hypothetical protein, at 4,281,087 to 4,281,422
_3809
Group
Condition
PfGW456L13
_3805
PfGW456L13
_3806
PfGW456L13
_3807
PfGW456L13
_3808
PfGW456L13
_3809
carbon source
octanoate (C)
-1.4
-0.5
-0.2
-3.8
-0.9
carbon source
L-Lactate (C)
-1.2
-0.5
-0.3
-1.4
-1.0
carbon source
D-Glucose (C)
-2.0
-0.1
+0.1
-1.8
+0.3
carbon source
D-Galactose (C)
-1.5
-0.5
-0.2
-0.5
-0.5
carbon source
Trisodium citrate (C)
-0.7
-0.3
-0.4
-1.9
+0.1
carbon source
L-Tryptophan (C)
-0.3
-0.2
+0.0
-2.4
-0.1
carbon source
D-Lactate (C)
-0.4
-0.3
-0.6
-0.8
-0.5
nitrogen source
L-Serine (N)
-0.3
-0.4
-0.2
-1.1
-0.5
carbon source
D-Gluconic Acid (C)
-1.0
-0.7
-0.1
-0.8
+0.2
carbon source
D-Galactose (C)
-0.5
-0.5
+0.0
-1.5
-0.0
carbon source
L-Arabinose (C)
-0.4
-0.4
-0.3
-1.3
+0.1
carbon source
D,L-Lactate (C)
-0.4
-0.8
-0.1
-1.0
+0.0
carbon source
L-Arabinose (C)
-0.1
-0.7
-0.1
-1.4
+0.1
carbon source
D-Serine (C)
-0.9
-0.2
+0.1
-1.0
-0.2
carbon source
L-Phenylalanine (C)
-0.7
+0.0
-0.0
-1.3
-0.2
nitrogen source
L-Histidine (N)
-0.4
-0.5
-0.1
-0.7
-0.4
carbon source
D-Alanine (C)
-0.4
+0.0
-0.0
-1.9
+0.2
carbon source
L-Malic (C)
-0.3
-0.3
-0.5
-0.4
-0.6
nitrogen source
NAG (N)
-0.3
-0.3
-0.2
-1.3
+0.1
carbon source
L-Histidine (C)
-0.5
-0.4
-0.2
-0.9
+0.0
carbon source
D-Gluconic Acid (C)
-0.8
-0.9
+0.0
-0.4
+0.3
carbon source
Glycerol (C)
-0.3
-0.5
-0.0
-1.3
+0.4
carbon source
L-Histidine (C)
-0.3
-0.2
-0.0
-1.4
+0.2
carbon source
D-Lactate (C)
-0.6
-0.7
+0.2
-0.7
+0.2
carbon source
L-Tryptophan (C)
+0.3
-0.3
-0.4
-1.4
+0.3
carbon source
L-Asparagine (C)
-0.6
-0.2
+0.1
-1.1
+0.4
carbon source
a-Ketoglutaric (C)
-0.6
-1.2
+0.2
+0.1
+0.1
carbon source
L-Phenylalanine (C)
+0.0
-0.5
-0.0
-1.1
+0.4
carbon source
a-Ketoglutaric (C)
-0.6
-0.4
+0.2
-0.8
+0.7
carbon source
D-Fructose (C)
-0.6
-0.4
+0.1
-0.5
+0.4
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