Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_375 and PfGW456L13_376 are separated by 564 nucleotidesPfGW456L13_376 and PfGW456L13_377 are separated by 13 nucleotidesPfGW456L13_377 and PfGW456L13_378 are separated by 72 nucleotidesPfGW456L13_378 and PfGW456L13_379 overlap by 4 nucleotides PfGW456L13_375 - transport permease protein of gamma-aminobutyrate, at 434,162 to 435,553 _375 PfGW456L13_376 - Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1), at 436,118 to 436,891 _376 PfGW456L13_377 - Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1), at 436,905 to 437,654 _377 PfGW456L13_378 - Arginine ABC transporter, permease protein ArtQ, at 437,727 to 438,422 _378 PfGW456L13_379 - Amino acid ABC transporter, permease protein, at 438,419 to 439,108 _379
Group Condition PfGW456L13_375 PfGW456L13_376 PfGW456L13_377 PfGW456L13_378 PfGW456L13_379
nitrogen source L-Lysine (N) +0.1 -0.7 -1.1 -1.6 -1.2
stress Lomefloxacin 0.0004 mM -0.2 +0.1 -1.2 -0.1 -0.1
stress D-Cycloserine 0.125 mg/ml +0.1 +0.0 -1.4 -0.0 +0.1
carbon source Trisodium citrate (C) +0.3 -0.6 -0.4 -0.2 -0.1
stress Paraquat dichloride 0.032 mg/ml +0.1 -0.2 -0.4 -0.2 -0.3
carbon source a-Ketoglutaric (C) +0.2 +0.0 -0.1 -0.1 -0.7
stress Fusidic 0.08 mg/ml -0.0 +0.2 -0.4 +0.0 -0.2
carbon source D-Alanine (C) -0.5 +0.5 +0.1 -0.1 -0.1
carbon source D-Alanine (C) -0.6 +0.5 -0.0 +0.1 -0.0
carbon source D-Galactose (C) +0.2 -0.1 +0.3 -0.0 -0.3
carbon source Putrescine (C) +0.4 -0.2 +0.0 +0.1 -0.2
stress Bacitracin 1 mg/ml +0.0 +0.5 -0.8 +0.1 +0.3
carbon source L-Alanine (C) -0.3 +0.4 +0.2 +0.0 +0.1
stress Vancomycin 0.5 mg/ml -0.2 +0.5 -0.3 +0.1 +0.2
carbon source octanoate (C) +0.2 +0.2 -1.0 +0.5 +0.4
carbon source L-Arabinose (C) +0.2 +0.3 -0.2 +0.0 +0.1
nitrogen source L-Valine (N) +0.7 -0.1 -0.1 -0.1 +0.1
nitrogen source D-Alanine (N) -0.2 +0.4 +0.2 +0.0 +0.0
carbon source Glycerol (C) -0.2 +0.3 +0.0 +0.2 +0.2
nitrogen source Glycine (N) -0.2 +0.6 +0.2 -0.0 +0.1
carbon source L-Alanine (C) -0.2 +0.5 +0.2 +0.0 +0.2
stress Chloride 400 mM +0.4 +0.2 +0.2 +0.2 +0.1
nitrogen source L-Serine (N) +0.6 +0.1 +0.1 +0.0 +0.3
stress Aluminum chloride 2.5 mM +0.3 +0.6 -0.2 +0.2 +0.3
nitrogen source D-Serine (N) +1.5 -0.2 -0.1 -0.1 +0.1
stress Aluminum chloride 5 mM +0.2 +0.5 +0.3 +0.2 +0.3
carbon source L-Valine (C) +0.6 +0.3 +0.1 +0.4 +0.4
carbon source L-Valine (C) +0.4 +0.3 +0.5 +0.3 +0.4
carbon source L-Tryptophan (C) +1.0 +0.6 +0.3 +0.3 +0.5
carbon source L-Tryptophan (C) +0.9 +0.6 +0.5 +0.5 +0.4
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