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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_373 and PfGW456L13_374 are separated by 6 nucleotides
PfGW456L13_374 and PfGW456L13_375 are separated by 71 nucleotides
PfGW456L13_375 and PfGW456L13_376 are separated by 564 nucleotides
PfGW456L13_376 and PfGW456L13_377 are separated by 13 nucleotides
PfGW456L13_373 - FIG00954739: hypothetical protein, at 433,209 to 433,631
_373
PfGW456L13_374 - FIG00954739: hypothetical protein, at 433,638 to 434,090
_374
PfGW456L13_375 - transport permease protein of gamma-aminobutyrate, at 434,162 to 435,553
_375
PfGW456L13_376 - Histidine ABC transporter, ATP-binding protein HisP (TC 3.A.1.3.1), at 436,118 to 436,891
_376
PfGW456L13_377 - Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1), at 436,905 to 437,654
_377
Group
Condition
PfGW456L13
_373
PfGW456L13
_374
PfGW456L13
_375
PfGW456L13
_376
PfGW456L13
_377
carbon source
a-Ketoglutaric (C)
-0.8
-1.0
+0.1
-0.1
-0.1
nitrogen source
L-Lysine (N)
+0.1
-0.1
+0.1
-0.7
-1.1
carbon source
L-Glutamine (C)
-0.1
-1.1
+0.2
-0.1
-0.2
stress
Lomefloxacin 0.0004 mM
-0.2
+0.2
-0.2
+0.1
-1.2
carbon source
octanoate (C)
-0.7
+0.2
+0.2
+0.2
-1.0
stress
D-Cycloserine 0.125 mg/ml
+0.1
+0.3
+0.1
+0.0
-1.4
carbon source
Putrescine (C)
-0.6
-0.5
+0.4
-0.2
+0.0
carbon source
a-Ketoglutaric (C)
-0.8
-0.2
+0.2
+0.0
-0.1
carbon source
L-Alanine (C)
+0.0
-0.3
-0.3
+0.4
+0.2
carbon source
Trisodium citrate (C)
+0.5
+0.2
+0.3
-0.6
-0.4
stress
Bacitracin 1 mg/ml
+0.2
+0.1
+0.0
+0.5
-0.8
stress
Vancomycin 0.5 mg/ml
+0.1
+0.0
-0.2
+0.5
-0.3
nitrogen source
L-Alanine (N)
-0.4
+0.3
-0.1
+0.3
+0.2
carbon source
D-Alanine (C)
+0.3
-0.1
-0.5
+0.5
+0.1
carbon source
D-Serine (C)
+0.4
-0.1
+0.4
-0.2
-0.2
nitrogen source
Glycine (N)
+0.0
-0.2
-0.2
+0.6
+0.2
carbon source
D-Alanine (C)
+0.4
+0.1
-0.6
+0.5
-0.0
carbon source
D-Gluconic Acid (C)
-0.3
+0.8
+0.3
-0.1
+0.0
stress
Aluminum chloride 2.5 mM
-0.0
+0.1
+0.3
+0.6
-0.2
carbon source
L-Histidine (C)
+0.7
+0.2
+0.2
+0.1
-0.3
nitrogen source
D-Alanine (N)
+0.0
+0.5
-0.2
+0.4
+0.2
stress
Aluminum chloride 5 mM
+0.1
-0.0
+0.2
+0.5
+0.3
carbon source
D-Galactose (C)
+0.9
+0.1
+0.2
-0.1
+0.3
carbon source
D-Lactate (C)
+0.5
+0.6
+0.0
+0.1
+0.3
carbon source
D-Gluconic Acid (C)
+0.9
+0.2
+0.2
+0.1
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
+0.9
+0.5
+0.3
+0.1
-0.2
carbon source
L-Valine (C)
+0.1
+0.4
+0.4
+0.3
+0.5
nitrogen source
D-Serine (N)
+0.4
+0.0
+1.5
-0.2
-0.1
carbon source
L-Tryptophan (C)
+0.1
-0.1
+0.9
+0.6
+0.5
carbon source
L-Tryptophan (C)
+0.3
+0.5
+1.0
+0.6
+0.3
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