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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3726 and PfGW456L13_3727 are separated by 157 nucleotides
PfGW456L13_3727 and PfGW456L13_3728 are separated by 130 nucleotides
PfGW456L13_3728 and PfGW456L13_3729 are separated by 134 nucleotides
PfGW456L13_3729 and PfGW456L13_3730 are separated by 183 nucleotides
PfGW456L13_3726 - FIG00761799: membrane protein, at 4,192,558 to 4,193,208
_3726
PfGW456L13_3727 - FIG00956189: hypothetical protein, at 4,193,366 to 4,193,797
_3727
PfGW456L13_3728 - Transcriptional Regulator, AraC family, at 4,193,928 to 4,194,743
_3728
PfGW456L13_3729 - alkylhydroperoxidase AhpD domain protein, at 4,194,878 to 4,195,396
_3729
PfGW456L13_3730 - Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2), at 4,195,580 to 4,196,668
_3730
Group
Condition
PfGW456L13
_3726
PfGW456L13
_3727
PfGW456L13
_3728
PfGW456L13
_3729
PfGW456L13
_3730
carbon source
a-Ketoglutaric (C)
-0.2
-0.9
-0.2
-0.7
-0.1
carbon source
D-Lactate (C)
-0.4
-0.6
-0.6
-0.2
+0.0
carbon source
D-Galactose (C)
-0.2
-0.4
-0.4
-0.2
-0.2
carbon source
L-Lactate (C)
-0.2
-0.2
+0.3
-1.4
+0.1
carbon source
Tween 20 (C)
-0.2
-0.2
+0.0
-0.6
-0.1
carbon source
L-Phenylalanine (C)
-0.1
-0.7
-0.3
+0.1
-0.0
carbon source
Putrescine (C)
-0.4
-0.0
-0.3
+0.1
-0.1
carbon source
L-Valine (C)
+0.1
-0.6
-0.1
-0.0
-0.1
carbon source
D-Fructose (C)
+0.0
-0.6
-0.2
+0.1
+0.1
carbon source
D-Fructose (C)
-0.3
-0.0
+0.2
-0.3
-0.2
carbon source
Glycerol (C)
+0.3
-0.3
-0.3
+0.0
+0.0
carbon source
L-Malic (C)
+0.1
-0.5
-0.2
+0.1
+0.2
carbon source
L-Glutamine (C)
+0.1
+0.3
-0.2
-0.4
+0.1
carbon source
L-Alanine (C)
+0.1
+0.4
-0.2
-0.3
-0.0
nitrogen source
L-Valine (N)
+0.1
+0.2
-0.3
+0.1
-0.2
carbon source
D-Gluconic Acid (C)
+0.3
+0.3
-0.4
-0.2
-0.0
nitrogen source
Gly-Glu (N)
+0.2
+0.1
+0.3
-0.2
-0.3
carbon source
D-Gluconic Acid (C)
-0.0
+0.4
-0.4
+0.2
-0.0
lb
LB
-0.3
+0.3
+0.2
+0.2
-0.2
stress
Cisplatin 0.0125 mg/ml
+0.3
+0.2
-0.3
+0.1
-0.0
nitrogen source
L-Glutamic (N)
-0.1
+0.5
-0.2
+0.1
-0.0
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
+0.6
-0.1
+0.1
-0.2
carbon source
octanoate (C)
+0.3
-0.2
+0.3
-0.1
+0.1
carbon source
a-Ketoglutaric (C)
-0.2
+0.9
-0.3
+0.0
-0.0
stress
Cobalt chloride 0.16 mM
+0.2
+0.3
-0.3
+0.2
-0.0
stress
Zinc 1 mM
+0.2
+0.4
-0.2
+0.1
+0.1
stress
Cephalothin 3 mg/ml
+0.2
+0.6
-0.4
+0.2
+0.2
carbon source
L-Arabinose (C)
+0.3
+0.1
-0.1
+0.3
+0.2
carbon source
L-Malic (C)
+0.3
+0.2
+0.3
-0.2
+0.2
stress
Lomefloxacin 0.0004 mM
+0.0
+0.6
+0.9
-0.3
+0.0
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