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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3689 and PfGW456L13_3690 are separated by 87 nucleotides
PfGW456L13_3690 and PfGW456L13_3691 are separated by 165 nucleotides
PfGW456L13_3691 and PfGW456L13_3692 are separated by 80 nucleotides
PfGW456L13_3692 and PfGW456L13_3693 are separated by 42 nucleotides
PfGW456L13_3689 - TonB-dependent receptor, at 4,150,882 to 4,153,008
_3689
PfGW456L13_3690 - hypothetical protein, at 4,153,096 to 4,154,373
_3690
PfGW456L13_3691 - FIG01200701: possible membrane protein, at 4,154,539 to 4,156,086
_3691
PfGW456L13_3692 - putative exported protein, at 4,156,167 to 4,157,000
_3692
PfGW456L13_3693 - Acetyltransferase, at 4,157,043 to 4,157,546
_3693
Group
Condition
PfGW456L13
_3689
PfGW456L13
_3690
PfGW456L13
_3691
PfGW456L13
_3692
PfGW456L13
_3693
carbon source
D-Fructose (C)
-0.0
-0.1
-0.1
-0.2
-1.0
carbon source
Putrescine (C)
-0.1
+0.3
-0.2
-0.3
-0.9
control
LB control
-0.0
-0.2
-0.1
-0.6
-0.2
stress
Cisplatin 0.0125 mg/ml
-0.1
-0.2
-0.0
-0.2
-0.3
carbon source
D-Lactate (C)
-0.1
-0.1
-0.1
+0.1
-0.5
carbon source
L-Glutamine (C)
+0.1
+0.0
-0.0
+0.0
-0.8
carbon source
succinate (C)
-0.0
-0.0
+0.1
+0.0
-0.7
stress
Lomefloxacin 0.0004 mM
-0.1
-0.2
+0.3
+0.2
-0.8
carbon source
D-Alanine (C)
+0.1
-0.1
+0.0
+0.0
-0.6
carbon source
L-Lactate (C)
+0.2
-0.2
-0.0
+0.0
-0.5
carbon source
D-Galactose (C)
-0.1
-0.1
-0.2
+0.2
-0.3
carbon source
L-Arabinose (C)
+0.1
-0.0
+0.2
-0.3
-0.3
carbon source
casaminos (C)
+0.1
-0.0
+0.1
+0.0
-0.6
carbon source
L-Histidine (C)
-0.0
+0.0
+0.1
+0.1
-0.6
carbon source
a-Ketoglutaric (C)
+0.1
-0.1
+0.2
-0.3
-0.4
carbon source
L-Malic (C)
+0.1
-0.1
-0.3
+0.1
-0.1
carbon source
D-Glucose (C)
+0.2
+0.1
-0.3
-0.1
-0.2
carbon source
octanoate (C)
-0.1
-0.1
+0.3
-0.2
-0.2
control
LB control
-0.1
+0.0
-0.0
-0.4
+0.3
stress
nitrite 5 mM
-0.1
+0.1
+0.2
-0.1
-0.3
control
LB control
-0.0
-0.1
+0.1
-0.4
+0.3
nitrogen source
L-Isoleucine (N)
+0.1
-0.2
-0.1
-0.1
+0.3
stress
Aluminum chloride 5 mM
-0.1
-0.2
+0.0
-0.1
+0.4
carbon source
D-Glucosamine Hydrochloride (C)
+0.0
-0.1
-0.1
-0.1
+0.5
carbon source
a-Ketoglutaric (C)
+0.2
-0.2
+0.3
+0.2
-0.3
carbon source
D,L-Lactate (C)
-0.1
-0.3
+0.0
-0.0
+0.8
nitrogen source
nitrate (N)
+0.1
+0.0
+0.1
-0.2
+0.4
lb
LB
+0.0
-0.2
+0.2
+0.1
+0.4
carbon source
L-Tryptophan (C)
-0.1
-0.1
+0.2
+0.1
+0.4
carbon source
D-Lactate (C)
+0.1
-0.2
+0.1
+0.0
+0.7
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