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Protein
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Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_365 and PfGW456L13_366 overlap by 4 nucleotides
PfGW456L13_366 and PfGW456L13_367 overlap by 4 nucleotides
PfGW456L13_367 and PfGW456L13_5160 are separated by 103 nucleotides
PfGW456L13_5160 and PfGW456L13_368 are separated by 321 nucleotides
PfGW456L13_365 - A/G-specific adenine glycosylase (EC 3.2.2.-), at 424,316 to 426,547
_365
PfGW456L13_366 - A/G-specific adenine glycosylase (EC 3.2.2.-), at 426,544 to 427,611
_366
PfGW456L13_367 - FIG001341: Probable Fe(2+)-trafficking protein YggX, at 427,608 to 427,880
_367
PfGW456L13_5160 - tRNA-Phe-GAA, at 427,984 to 428,056
_5160
PfGW456L13_368 - hypothetical protein, at 428,378 to 429,457
_368
Group
Condition
PfGW456L13
_365
PfGW456L13
_366
PfGW456L13
_367
PfGW456L13
_5160
PfGW456L13
_368
carbon source
L-Lactate (C)
-0.1
-1.0
-2.6
N.D.
+0.1
stress
Thallium(I) acetate 0.002 mg/ml
-0.0
-0.2
-3.0
N.D.
+0.1
stress
Thallium(I) acetate 0.004 mg/ml
-0.0
-0.0
-2.5
N.D.
+0.0
carbon source
D-Glucose (C)
-0.1
-0.6
-2.0
N.D.
+0.3
carbon source
Trisodium citrate (C)
-0.0
-0.2
-2.1
N.D.
-0.1
nitrogen source
L-Citrulline (N)
+0.2
-0.6
-1.4
N.D.
-0.2
carbon source
L-Glutamine (C)
+0.1
-0.3
-1.3
N.D.
-0.4
control
LB
-0.2
-0.5
-0.8
N.D.
-0.1
carbon source
D-Gluconic Acid (C)
-0.2
-0.2
-1.4
N.D.
+0.3
stress
Cobalt chloride 0.16 mM
-0.1
-0.0
-1.3
N.D.
+0.1
control
LB control
-0.4
+0.1
-1.0
N.D.
-0.0
nitrogen source
Ammonium chloride (N)
-0.2
+0.2
-1.3
N.D.
+0.1
nitrogen source
Gly-DL-Asp (N)
-0.1
+0.2
-1.5
N.D.
+0.3
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.6
+0.2
-0.9
N.D.
+0.1
nitrogen source
L-Glutamine (N)
+0.3
+0.1
-1.8
N.D.
+0.2
stress
Paraquat dichloride 0.032 mg/ml
-0.2
+0.2
-1.2
N.D.
+0.0
stress
Bacitracin 1 mg/ml
+0.2
+0.1
-1.4
N.D.
+0.0
nitrogen source
Cytosine (N)
-0.0
+0.1
-1.4
N.D.
+0.1
control
LB control
-0.4
+0.2
-1.1
N.D.
+0.2
carbon source
succinate (C)
-0.1
+0.4
-1.1
N.D.
-0.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.1
+0.3
-1.1
N.D.
+0.1
carbon source
D-Gluconic Acid (C)
+0.5
+0.4
-1.2
N.D.
-0.2
stress
Vancomycin 0.5 mg/ml
+0.9
+0.3
-1.7
N.D.
+0.1
stress
Cisplatin 0.0125 mg/ml
-0.2
+0.4
-0.8
N.D.
+0.1
nitrogen source
D-Serine (N)
+0.1
+0.3
-0.7
N.D.
+0.3
carbon source
L-Arabinose (C)
-0.2
-0.3
+0.9
N.D.
-0.1
stress
Lomefloxacin 0.0004 mM
-0.6
+0.1
+1.0
N.D.
+0.1
stress
nitrate 200 mM
+0.1
-0.3
+1.5
N.D.
+0.0
stress
Chloride 400 mM
+0.4
+0.2
+1.1
N.D.
+0.1
carbon source
octanoate (C)
-0.9
-0.0
+4.0
N.D.
-0.5
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