Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3651 and PfGW456L13_3652 are separated by 117 nucleotidesPfGW456L13_3652 and PfGW456L13_3653 are separated by 280 nucleotidesPfGW456L13_3653 and PfGW456L13_3654 are separated by 63 nucleotidesPfGW456L13_3654 and PfGW456L13_3655 are separated by 1090 nucleotides PfGW456L13_3651 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 4,110,638 to 4,111,579 _3651 PfGW456L13_3652 - Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7), at 4,111,697 to 4,113,145 _3652 PfGW456L13_3653 - FIG024746: hypothetical protein, at 4,113,426 to 4,113,872 _3653 PfGW456L13_3654 - FIG035246: DoxX family protein, at 4,113,936 to 4,114,610 _3654 PfGW456L13_3655 - Bll2250 protein, at 4,115,701 to 4,116,228 _3655
Group Condition PfGW456L13_3651 PfGW456L13_3652 PfGW456L13_3653 PfGW456L13_3654 PfGW456L13_3655
carbon source Trisodium citrate (C) -0.2 -0.0 -0.6 -0.3 -0.5
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.0 -0.1 -0.2 -0.7 -0.3
carbon source octanoate (C) -0.5 +0.0 -0.0 -0.4 -0.4
carbon source D-Gluconic Acid (C) -0.4 +0.0 -0.3 -0.5 +0.0
carbon source D-Glucose (C) -0.1 -0.1 +0.5 -0.7 -0.4
carbon source D-Lactate (C) -0.3 -0.2 -0.1 +0.0 -0.2
carbon source Glycerol (C) -0.3 -0.2 -0.1 -0.4 +0.1
carbon source L-Valine (C) -0.3 -0.1 -0.0 -0.3 +0.0
carbon source Putrescine (C) -0.4 -0.3 -0.2 -0.5 +0.7
carbon source L-Valine (C) -0.1 -0.1 +0.0 -0.3 -0.3
carbon source a-Ketoglutaric (C) -0.4 +0.0 -0.3 -0.6 +0.6
carbon source succinate (C) +0.1 +0.1 -0.2 +0.0 -0.7
stress Lomefloxacin 0.0004 mM -0.5 -0.2 -0.2 -0.1 +0.4
carbon source D-Lactate (C) -0.3 +0.1 +0.1 -0.3 -0.0
carbon source L-Glutamine (C) -0.3 -0.1 -0.3 +0.2 -0.1
carbon source D-Galactose (C) -0.4 -0.0 -0.4 +0.2 +0.2
stress Dimethyl Sulfoxide 7.5 vol% -0.1 +0.0 -0.1 +0.2 -0.3
nitrogen source L-Histidine (N) -0.1 +0.1 -0.2 -0.2 +0.2
carbon source a-Ketoglutaric (C) -0.3 +0.2 +0.2 +0.2 -0.4
carbon source L-Asparagine (C) -0.3 +0.1 -0.2 +0.0 +0.3
stress Vancomycin 0.5 mg/ml -0.1 -0.2 -0.2 +0.4 -0.0
stress nitrite 5 mM +0.1 +0.1 -0.2 -0.2 +0.3
nitrogen source Gly-Glu (N) -0.1 +0.0 -0.0 -0.3 +0.5
carbon source D-Gluconic Acid (C) -0.1 +0.0 -0.2 -0.2 +0.6
nitrogen source L-Phenylalanine (N) -0.3 -0.0 +0.1 -0.2 +0.5
stress nitrite 10 mM +0.1 +0.1 -0.2 -0.2 +0.5
stress Aluminum chloride 5 mM +0.2 +0.2 -0.2 -0.2 +0.5
carbon source D-Fructose (C) -0.2 +0.0 -0.1 +0.2 +0.6
carbon source D-Serine (C) +0.3 +0.1 +0.1 +0.3 +0.2
carbon source D-Serine (C) +0.2 +0.5 +0.2 +0.2 +0.1
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