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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3651 and PfGW456L13_3652 are separated by 117 nucleotides
PfGW456L13_3652 and PfGW456L13_3653 are separated by 280 nucleotides
PfGW456L13_3653 and PfGW456L13_3654 are separated by 63 nucleotides
PfGW456L13_3654 and PfGW456L13_3655 are separated by 1090 nucleotides
PfGW456L13_3651 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 4,110,638 to 4,111,579
_3651
PfGW456L13_3652 - Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7), at 4,111,697 to 4,113,145
_3652
PfGW456L13_3653 - FIG024746: hypothetical protein, at 4,113,426 to 4,113,872
_3653
PfGW456L13_3654 - FIG035246: DoxX family protein, at 4,113,936 to 4,114,610
_3654
PfGW456L13_3655 - Bll2250 protein, at 4,115,701 to 4,116,228
_3655
Group
Condition
PfGW456L13
_3651
PfGW456L13
_3652
PfGW456L13
_3653
PfGW456L13
_3654
PfGW456L13
_3655
carbon source
Trisodium citrate (C)
-0.2
-0.0
-0.6
-0.3
-0.5
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.0
-0.1
-0.2
-0.7
-0.3
carbon source
octanoate (C)
-0.5
+0.0
-0.0
-0.4
-0.4
carbon source
D-Gluconic Acid (C)
-0.4
+0.0
-0.3
-0.5
+0.0
carbon source
D-Glucose (C)
-0.1
-0.1
+0.5
-0.7
-0.4
carbon source
D-Lactate (C)
-0.3
-0.2
-0.1
+0.0
-0.2
carbon source
Glycerol (C)
-0.3
-0.2
-0.1
-0.4
+0.1
carbon source
L-Valine (C)
-0.3
-0.1
-0.0
-0.3
+0.0
carbon source
Putrescine (C)
-0.4
-0.3
-0.2
-0.5
+0.7
carbon source
L-Valine (C)
-0.1
-0.1
+0.0
-0.3
-0.3
carbon source
a-Ketoglutaric (C)
-0.4
+0.0
-0.3
-0.6
+0.6
carbon source
succinate (C)
+0.1
+0.1
-0.2
+0.0
-0.7
stress
Lomefloxacin 0.0004 mM
-0.5
-0.2
-0.2
-0.1
+0.4
carbon source
D-Lactate (C)
-0.3
+0.1
+0.1
-0.3
-0.0
carbon source
L-Glutamine (C)
-0.3
-0.1
-0.3
+0.2
-0.1
carbon source
D-Galactose (C)
-0.4
-0.0
-0.4
+0.2
+0.2
stress
Dimethyl Sulfoxide 7.5 vol%
-0.1
+0.0
-0.1
+0.2
-0.3
nitrogen source
L-Histidine (N)
-0.1
+0.1
-0.2
-0.2
+0.2
carbon source
a-Ketoglutaric (C)
-0.3
+0.2
+0.2
+0.2
-0.4
carbon source
L-Asparagine (C)
-0.3
+0.1
-0.2
+0.0
+0.3
stress
Vancomycin 0.5 mg/ml
-0.1
-0.2
-0.2
+0.4
-0.0
stress
nitrite 5 mM
+0.1
+0.1
-0.2
-0.2
+0.3
nitrogen source
Gly-Glu (N)
-0.1
+0.0
-0.0
-0.3
+0.5
carbon source
D-Gluconic Acid (C)
-0.1
+0.0
-0.2
-0.2
+0.6
nitrogen source
L-Phenylalanine (N)
-0.3
-0.0
+0.1
-0.2
+0.5
stress
nitrite 10 mM
+0.1
+0.1
-0.2
-0.2
+0.5
stress
Aluminum chloride 5 mM
+0.2
+0.2
-0.2
-0.2
+0.5
carbon source
D-Fructose (C)
-0.2
+0.0
-0.1
+0.2
+0.6
carbon source
D-Serine (C)
+0.3
+0.1
+0.1
+0.3
+0.2
carbon source
D-Serine (C)
+0.2
+0.5
+0.2
+0.2
+0.1
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