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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_3626 and PfGW456L13_3627 are separated by 235 nucleotides
PfGW456L13_3627 and PfGW456L13_3628 are separated by 234 nucleotides
PfGW456L13_3628 and PfGW456L13_3629 are separated by 189 nucleotides
PfGW456L13_3629 and PfGW456L13_3630 are separated by 92 nucleotides
PfGW456L13_3626 - FIG00933687: hypothetical protein, at 4,081,414 to 4,083,846
_3626
PfGW456L13_3627 - Predicted periplasmic or secreted lipoprotein, at 4,084,082 to 4,084,432
_3627
PfGW456L13_3628 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 4,084,667 to 4,085,503
_3628
PfGW456L13_3629 - Lactoylglutathione lyase and related lyases, at 4,085,693 to 4,086,076
_3629
PfGW456L13_3630 - S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284), at 4,086,169 to 4,087,287
_3630
Group
Condition
PfGW456L13
_3626
PfGW456L13
_3627
PfGW456L13
_3628
PfGW456L13
_3629
PfGW456L13
_3630
carbon source
D-Gluconic Acid (C)
-0.3
+0.2
-0.0
-2.1
-0.2
nitrogen source
Gly-DL-Asp (N)
+0.1
+0.3
-0.0
-2.2
-0.3
carbon source
D,L-Lactate (C)
-0.3
+0.0
-0.0
-1.8
+0.1
nitrogen source
L-Asparagine (N)
-0.0
-0.2
-0.2
-0.9
-0.1
carbon source
D-Fructose (C)
-0.5
-0.1
+0.0
-0.9
+0.1
carbon source
D-Galactose (C)
-0.1
-0.8
-0.2
+0.1
-0.2
lb
LB
-0.1
-0.2
-0.1
-0.7
-0.1
carbon source
L-Valine (C)
+0.0
-0.0
+0.1
-1.0
-0.1
control
LB control
-0.0
+0.0
-0.1
-1.0
+0.2
carbon source
D-Serine (C)
-0.0
+0.1
-0.1
-0.8
+0.0
carbon source
D-Glucose (C)
-0.3
-0.3
-0.1
+0.5
-0.5
nitrogen source
L-Citrulline (N)
-0.0
+0.4
-0.1
-0.8
-0.3
stress
Fusidic 0.08 mg/ml
+0.2
+0.0
-0.1
-0.7
-0.2
stress
Lomefloxacin 0.0004 mM
+0.4
-0.0
+0.1
-0.7
-0.5
carbon source
L-Glutamine (C)
-0.1
+0.3
-0.3
-0.6
+0.0
carbon source
D-Glucosamine Hydrochloride (C)
-0.2
+0.1
+0.1
-0.4
-0.2
carbon source
D-Lactate (C)
-0.4
-0.2
+0.0
+0.7
-0.6
carbon source
Glycerol (C)
+0.2
-0.6
-0.2
-0.1
+0.1
carbon source
L-Tryptophan (C)
-0.1
-0.4
+0.1
-0.4
+0.1
carbon source
octanoate (C)
+0.2
-0.8
+0.2
+0.1
-0.3
nitrogen source
D-Alanine (N)
-0.2
-0.2
-0.2
+0.3
-0.2
carbon source
D-Alanine (C)
+0.2
+0.1
+0.0
-0.7
+0.0
carbon source
succinate (C)
+0.3
-0.0
+0.1
-0.9
+0.2
carbon source
Trisodium citrate (C)
-0.2
+0.4
-0.2
+0.1
-0.2
carbon source
L-Tryptophan (C)
-0.2
-0.3
-0.3
+0.8
-0.1
stress
Fusidic 0.03 mg/ml
-0.1
+0.2
-0.1
+0.5
-0.3
carbon source
L-Alanine (C)
-0.1
-0.2
-0.1
+1.0
-0.1
carbon source
D-Galactose (C)
-0.2
+0.2
+0.1
+0.9
-0.5
carbon source
L-Arabinose (C)
-0.0
+0.3
-0.3
+0.7
-0.0
carbon source
Putrescine (C)
-0.2
+0.5
+0.3
+0.2
+0.3
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