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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3620 and PfGW456L13_3621 are separated by 104 nucleotides
PfGW456L13_3621 and PfGW456L13_3622 are separated by 2 nucleotides
PfGW456L13_3622 and PfGW456L13_3623 are separated by 292 nucleotides
PfGW456L13_3623 and PfGW456L13_3624 are separated by 817 nucleotides
PfGW456L13_3620 - L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1), at 4,075,315 to 4,076,256
_3620
PfGW456L13_3621 - HTH-type transcriptional regulator BetI, at 4,076,361 to 4,076,936
_3621
PfGW456L13_3622 - Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7), at 4,076,939 to 4,078,363
_3622
PfGW456L13_3623 - D-serine dehydratase transcriptional activator, at 4,078,656 to 4,079,009
_3623
PfGW456L13_3624 - L-lysine permease, at 4,079,827 to 4,080,450
_3624
Group
Condition
PfGW456L13
_3620
PfGW456L13
_3621
PfGW456L13
_3622
PfGW456L13
_3623
PfGW456L13
_3624
carbon source
D-Fructose (C)
-0.2
-1.2
+0.0
-0.1
+0.1
carbon source
Putrescine (C)
+0.0
-0.5
-0.4
+0.2
-0.2
carbon source
L-Malic (C)
+0.3
-0.0
+0.0
-0.8
-0.4
carbon source
D-Fructose (C)
+0.1
-0.5
+0.1
-0.5
+0.1
control
LB
+0.1
-0.4
+0.1
-0.4
-0.2
carbon source
a-Ketoglutaric (C)
+0.2
-0.3
-0.2
-0.6
+0.3
stress
Lomefloxacin 0.0004 mM
-0.5
-0.2
-0.2
+0.8
-0.4
carbon source
D-Galactose (C)
-0.1
-0.4
-0.2
+0.3
+0.0
carbon source
Glycerol (C)
-0.1
-0.6
+0.2
-0.2
+0.4
carbon source
L-Lactate (C)
-0.1
-0.4
-0.4
+0.6
+0.0
carbon source
L-Valine (C)
-0.0
-0.6
+0.1
+0.2
+0.0
stress
Paraquat dichloride 0.032 mg/ml
-0.1
-0.3
+0.1
+0.4
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.3
+0.0
-0.1
+0.4
+0.1
nitrogen source
L-Leucine (N)
-0.0
-0.2
-0.2
+0.6
+0.1
stress
Fusidic 0.08 mg/ml
+0.1
-0.3
-0.1
+0.4
+0.1
carbon source
D-Serine (C)
+0.1
-0.4
+0.1
+0.4
+0.1
carbon source
D-Galactose (C)
-0.1
-0.3
-0.1
+0.5
+0.2
control
LB control
-0.1
-0.3
+0.0
+0.5
+0.0
stress
Aluminum chloride 5 mM
+0.1
-0.2
+0.2
+0.3
-0.1
carbon source
L-Glutamine (C)
+0.0
-0.3
-0.0
+0.9
-0.2
nitrogen source
L-Histidine (N)
+0.0
+0.2
-0.1
+0.6
-0.2
carbon source
Trisodium citrate (C)
+0.1
+0.3
-0.1
+0.4
-0.1
carbon source
L-Alanine (C)
-0.1
-0.1
+0.1
+0.5
+0.1
carbon source
D-Gluconic Acid (C)
-0.0
-0.5
-0.1
+1.1
+0.0
carbon source
L-Arabinose (C)
+0.3
+0.2
-0.1
+0.3
-0.1
nitrogen source
Gly-DL-Asp (N)
-0.1
+0.3
-0.1
+0.5
+0.0
stress
Cisplatin 0.0125 mg/ml
-0.1
+0.3
-0.1
+0.6
+0.1
carbon source
octanoate (C)
-0.1
-0.3
-0.1
+1.4
-0.1
stress
A22 0.04 mg/ml
-0.1
+0.5
-0.0
+0.5
-0.1
carbon source
L-Tryptophan (C)
+0.2
+0.2
+0.1
+0.5
+0.1
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