Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_34 and PfGW456L13_35 are separated by 108 nucleotidesPfGW456L13_35 and PfGW456L13_36 are separated by 55 nucleotidesPfGW456L13_36 and PfGW456L13_37 are separated by 12 nucleotidesPfGW456L13_37 and PfGW456L13_38 overlap by 1 nucleotides PfGW456L13_34 - Sensory box histidine kinase, at 39,849 to 42,536 _34 PfGW456L13_35 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 42,645 to 43,208 _35 PfGW456L13_36 - lipoprotein, putative, at 43,264 to 43,872 _36 PfGW456L13_37 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 43,885 to 44,634 _37 PfGW456L13_38 - FIG00953349: hypothetical protein, at 44,634 to 44,936 _38
Group Condition PfGW456L13_34 PfGW456L13_35 PfGW456L13_36 PfGW456L13_37 PfGW456L13_38
carbon source D-Galactose (C) -0.2 -0.2 -0.2 -0.2 +0.0
carbon source L-Glutamine (C) +0.0 -0.2 -0.1 -0.0 -0.5
carbon source L-Histidine (C) -0.1 -0.1 +0.1 -0.2 -0.3
nitrogen source L-Threonine (N) +0.0 +0.1 -0.4 -0.1 -0.3
carbon source D-Mannose (C) -0.0 +0.1 -0.2 +0.2 -0.5
control LB control -0.1 +0.1 -0.4 +0.1 -0.2
carbon source L-Valine (C) +0.1 +0.2 +0.0 -0.3 -0.5
nitrogen source L-Phenylalanine (N) +0.1 +0.1 -0.1 +0.1 -0.6
carbon source a-Ketoglutaric (C) +0.1 +0.2 -0.2 +0.1 -0.5
carbon source L-Arabinose (C) -0.2 +0.1 -0.1 -0.3 +0.2
carbon source D-Glucosamine Hydrochloride (C) +0.2 +0.1 +0.2 -0.4 -0.2
carbon source Putrescine (C) -0.0 -0.1 +0.1 -0.3 +0.6
stress Bacitracin 1 mg/ml -0.2 -0.2 +0.1 +0.0 +0.5
carbon source L-Arabinose (C) -0.2 +0.1 +0.3 -0.1 +0.2
nitrogen source L-Glutamic (N) +0.2 +0.2 +0.2 -0.0 -0.2
stress Vancomycin 0.5 mg/ml -0.1 -0.1 +0.0 +0.2 +0.4
carbon source Glycerol (C) -0.2 -0.0 +0.2 +0.0 +0.4
nitrogen source Putrescine (N) +0.1 +0.2 +0.2 +0.1 -0.1
carbon source D-Gluconic Acid (C) +0.1 -0.3 -0.1 +0.3 +0.7
carbon source L-Lactate (C) +0.0 +0.3 -0.1 -0.2 +0.6
carbon source L-Malic (C) +0.1 +0.3 -0.1 -0.0 +0.3
carbon source Glycerol (C) +0.1 +0.2 +0.1 -0.1 +0.4
carbon source D,L-Lactate (C) +0.2 +0.1 +0.2 -0.1 +0.2
carbon source D-Gluconic Acid (C) +0.5 +0.0 +0.1 +0.2 -0.2
carbon source succinate (C) +0.1 +0.0 +0.2 -0.1 +0.4
carbon source D-Lactate (C) +0.3 -0.2 +0.0 +0.4 +0.4
stress Fusidic 0.08 mg/ml +0.1 +0.2 +0.4 +0.2 +0.1
carbon source D-Fructose (C) +0.0 +0.3 -0.0 -0.1 +0.8
carbon source Tween 20 (C) +0.1 +0.3 +0.3 +0.2 +0.1
carbon source D-Lactate (C) +0.1 +0.1 +0.4 +0.3 +0.2
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