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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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500 nt
PfGW456L13_357 and PfGW456L13_358 are separated by 78 nucleotides
PfGW456L13_358 and PfGW456L13_359 are separated by 9 nucleotides
PfGW456L13_359 and PfGW456L13_360 are separated by 42 nucleotides
PfGW456L13_360 and PfGW456L13_361 are separated by 0 nucleotides
PfGW456L13_357 - ABC-type amino acid transport, signal transduction systems, periplasmic component/domain, at 417,787 to 418,542
_357
PfGW456L13_358 - Imidazole glycerol phosphate synthase cyclase subunit (EC 4.1.3.-), at 418,621 to 419,391
_358
PfGW456L13_359 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
(from data)
, at 419,401 to 420,138
_359
PfGW456L13_360 - FIG00956267: hypothetical protein, at 420,181 to 420,438
_360
PfGW456L13_361 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 420,439 to 421,077
_361
Group
Condition
PfGW456L13
_357
PfGW456L13
_358
PfGW456L13
_359
PfGW456L13
_360
PfGW456L13
_361
carbon source
L-Malic (C)
+0.1
-6.0
-4.8
-2.7
-6.8
carbon source
L-Asparagine (C)
-0.1
-6.3
-5.7
-1.5
-6.4
carbon source
D-Lactate (C)
-0.1
-6.4
-4.9
-2.0
-6.5
carbon source
D-Mannose (C)
-0.1
-6.5
-5.2
-2.0
-6.1
carbon source
D-Lactate (C)
+0.1
-6.0
-5.9
-1.3
-6.8
nitrogen source
NAG (N)
+0.1
-6.5
-5.3
-2.9
-5.2
carbon source
Glycerol (C)
-0.3
-5.3
-6.1
-1.4
-6.7
carbon source
L-Tryptophan (C)
-0.1
-6.4
-5.6
-2.0
-5.6
carbon source
D-Galactose (C)
-0.2
-6.6
-4.9
-1.1
-6.6
carbon source
L-Asparagine (C)
-0.1
-6.6
-5.2
-1.1
-6.5
carbon source
D-Galactose (C)
-0.2
-5.2
-5.5
-2.6
-5.8
carbon source
D-Glucose (C)
+0.1
-6.3
-5.6
-2.3
-5.3
carbon source
L-Tryptophan (C)
+0.1
-6.1
-5.5
-1.9
-5.8
nitrogen source
nitrate (N)
+0.1
-6.3
-4.7
-2.5
-6.0
carbon source
D-Mannose (C)
+0.1
-5.9
-5.4
-2.3
-5.7
nitrogen source
Glycine (N)
-0.0
-6.5
-4.8
-1.7
-6.2
carbon source
D,L-Lactate (C)
+0.0
-5.8
-5.9
-2.1
-5.3
nitrogen source
L-Proline (N)
-0.1
-6.2
-4.7
-2.3
-5.8
carbon source
Trisodium citrate (C)
-0.2
-6.5
-6.3
-0.5
-5.6
nitrogen source
L-Tryptophan (N)
+0.1
-6.3
-4.9
-1.9
-6.0
carbon source
a-Ketoglutaric (C)
-0.3
-6.1
-4.5
-2.2
-6.0
nitrogen source
L-Valine (N)
-0.4
-6.4
-4.8
-1.5
-5.9
carbon source
D-Gluconic Acid (C)
+0.1
-6.3
-4.7
-1.3
-6.6
carbon source
L-Valine (C)
-0.2
-6.1
-4.9
-2.0
-5.7
nitrogen source
L-Glutamine (N)
+0.2
-6.0
-4.4
-2.6
-6.0
carbon source
L-Phenylalanine (C)
-0.1
-6.1
-5.1
-1.7
-5.4
carbon source
D-Alanine (C)
+0.1
-6.0
-5.3
-2.5
-4.7
carbon source
L-Valine (C)
-0.4
-5.0
-4.9
-2.3
-5.8
carbon source
Glycerol (C)
+0.6
-5.9
-5.8
-1.1
-6.0
nitrogen source
L-Leucine (N)
+0.1
-6.1
-4.9
-1.7
-5.7
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