Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3556 and PfGW456L13_3557 are separated by 240 nucleotidesPfGW456L13_3557 and PfGW456L13_3558 are separated by 170 nucleotidesPfGW456L13_3558 and PfGW456L13_3559 are separated by 175 nucleotidesPfGW456L13_3559 and PfGW456L13_3560 are separated by 132 nucleotides PfGW456L13_3556 - hypothetical protein, at 4,005,374 to 4,005,661 _3556 PfGW456L13_3557 - Nitrate/nitrite response regulator protein, at 4,005,902 to 4,006,531 _3557 PfGW456L13_3558 - Glutathione-regulated potassium-efflux system protein KefB, at 4,006,702 to 4,008,510 _3558 PfGW456L13_3559 - DNA alkylation repair enzyme, at 4,008,686 to 4,009,783 _3559 PfGW456L13_3560 - Transcriptional regulator, LysR family, at 4,009,916 to 4,010,818 _3560
Group Condition PfGW456L13_3556 PfGW456L13_3557 PfGW456L13_3558 PfGW456L13_3559 PfGW456L13_3560
carbon source a-Ketoglutaric (C) +0.0 -0.2 -1.9 -0.4 +0.1
carbon source a-Ketoglutaric (C) -1.8 -0.5 +0.6 -0.0 -0.6
carbon source D-Mannose (C) -0.4 -0.8 -0.9 -0.0 +0.2
carbon source D-Gluconic Acid (C) -1.5 -0.6 +0.4 -0.0 +0.3
carbon source D-Galactose (C) -1.1 -0.1 -0.5 +0.0 +0.3
nitrogen source Gly-Glu (N) +0.1 -0.6 -0.8 +0.0 -0.1
nitrogen source Uridine (N) -0.3 -0.6 -0.4 -0.2 +0.1
nitrogen source L-Lysine (N) -0.4 -0.3 -0.5 +0.2 -0.1
carbon source L-Arabinose (C) -1.1 +0.6 -0.5 -0.2 +0.1
carbon source D-Gluconic Acid (C) -0.3 -0.4 -0.9 -0.0 +0.6
carbon source D-Fructose (C) -0.6 +0.1 -0.5 +0.1 -0.1
carbon source D-Lactate (C) +0.3 -0.6 -0.6 +0.0 -0.1
carbon source Trisodium citrate (C) -0.9 +0.5 -0.9 +0.2 +0.3
nitrogen source L-Leucine (N) +0.3 -0.6 -0.4 +0.2 -0.2
carbon source L-Valine (C) +0.5 +0.1 -1.1 -0.1 +0.0
stress Lomefloxacin 0.0004 mM -1.4 +0.3 -0.1 +0.2 +0.4
control LB control -1.0 +0.5 +0.1 -0.1 +0.0
carbon source L-Histidine (C) -0.3 +0.2 -0.7 +0.0 +0.4
carbon source D-Glucose (C) -0.6 -0.1 -0.4 +0.2 +0.4
carbon source L-Tryptophan (C) +0.1 +0.4 -1.0 +0.0 +0.1
carbon source D-Alanine (C) -0.1 -0.5 -0.7 -0.1 +1.2
carbon source D-Serine (C) +0.3 +0.2 -0.6 -0.2 +0.3
carbon source L-Valine (C) +0.3 -0.5 +0.6 +0.0 -0.3
carbon source Glycerol (C) -0.9 +0.7 +0.3 +0.2 +0.2
lb LB +0.6 +0.5 -0.4 -0.1 +0.2
carbon source succinate (C) +1.1 -0.2 -0.3 +0.2 +0.0
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.6 -0.2 +0.6 -0.0 -0.1
carbon source D-Alanine (C) +0.0 -0.4 +0.5 +0.0 +1.2
carbon source D-Fructose (C) +1.6 -0.3 -0.0 -0.0 +0.3
carbon source octanoate (C) +1.7 +1.0 -0.8 -0.4 +0.2
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