Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3547 and PfGW456L13_3548 are separated by 13 nucleotidesPfGW456L13_3548 and PfGW456L13_3549 are separated by 260 nucleotidesPfGW456L13_3549 and PfGW456L13_3550 are separated by 3 nucleotidesPfGW456L13_3550 and PfGW456L13_3551 are separated by 173 nucleotides PfGW456L13_3547 - Cobalt-zinc-cadmium resistance protein CzcD, at 3,990,369 to 3,991,301 _3547 PfGW456L13_3548 - FIG074102: hypothetical protein, at 3,991,315 to 3,991,590 _3548 PfGW456L13_3549 - pyridoxal phosphate-dependent deaminase, putative, at 3,991,851 to 3,992,882 _3549 PfGW456L13_3550 - peptidyl-prolyl cis-trans isomerase, FkbP-type, at 3,992,886 to 3,993,224 _3550 PfGW456L13_3551 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 3,993,398 to 3,994,471 _3551
Group Condition PfGW456L13_3547 PfGW456L13_3548 PfGW456L13_3549 PfGW456L13_3550 PfGW456L13_3551
carbon source Trisodium citrate (C) -6.1 N.D. +0.1 -0.9 +0.2
stress Cobalt chloride 0.16 mM -3.8 N.D. +0.0 +0.1 -0.4
carbon source L-Lactate (C) -0.7 N.D. -0.0 -1.2 -0.4
carbon source a-Ketoglutaric (C) -0.6 N.D. -0.6 +0.0 -0.7
carbon source octanoate (C) +0.2 N.D. -0.2 -1.3 -0.4
carbon source D-Galactose (C) -0.9 N.D. +0.4 -0.7 -0.3
carbon source Glycerol (C) +0.2 N.D. -0.0 -1.4 -0.2
carbon source D-Glucose (C) +0.1 N.D. -0.1 -1.0 -0.4
carbon source Tween 20 (C) -0.1 N.D. -0.1 -0.6 -0.4
carbon source a-Ketoglutaric (C) -0.3 N.D. +0.7 -1.2 -0.4
carbon source L-Arabinose (C) -0.2 N.D. -0.1 -0.8 +0.0
carbon source L-Tryptophan (C) -0.2 N.D. +0.1 -0.8 -0.2
stress nitrate 200 mM -0.2 N.D. -0.3 -0.5 -0.2
nitrogen source Glycine (N) -0.1 N.D. -0.1 -0.4 -0.5
nitrogen source Putrescine (N) -0.3 N.D. -0.3 -0.4 -0.0
carbon source D-Lactate (C) -0.9 N.D. -0.1 -0.1 +0.1
carbon source L-Histidine (C) +0.2 N.D. -0.0 -0.4 -0.7
carbon source D-Serine (C) +0.0 N.D. +0.2 -1.0 -0.2
carbon source Putrescine (C) -0.7 N.D. +0.1 -0.3 +0.3
carbon source D-Fructose (C) +0.5 N.D. +0.1 -1.1 -0.2
carbon source D-Fructose (C) +0.4 N.D. +0.2 -0.9 -0.3
carbon source L-Malic (C) -0.4 N.D. +0.3 -0.7 +0.3
carbon source L-Tryptophan (C) -0.5 N.D. +0.4 -0.2 -0.1
carbon source D-Alanine (C) +0.1 N.D. -0.1 -0.6 +0.4
stress Aluminum chloride 5 mM -0.3 N.D. -0.2 +0.5 +0.0
lb LB +0.5 N.D. -0.2 +0.2 -0.4
carbon source L-Malic (C) -0.2 N.D. -0.1 +0.5 +0.4
stress Lomefloxacin 0.0004 mM +0.6 N.D. -0.2 +0.8 -0.6
stress Dimethyl Sulfoxide 7.5 vol% +0.4 N.D. +0.3 +0.4 +0.0
carbon source D-Gluconic Acid (C) +0.1 N.D. +0.4 +0.1 +0.4
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