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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3511 and PfGW456L13_3512 overlap by 17 nucleotides
PfGW456L13_3512 and PfGW456L13_3513 are separated by 220 nucleotides
PfGW456L13_3513 and PfGW456L13_3514 are separated by 19 nucleotides
PfGW456L13_3514 and PfGW456L13_3515 overlap by 4 nucleotides
PfGW456L13_3511 - Sensory box histidine kinase/response regulator, at 3,952,105 to 3,953,841
_3511
PfGW456L13_3512 - Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10), at 3,953,825 to 3,954,988
_3512
PfGW456L13_3513 - Coenzyme PQQ synthesis protein E, at 3,955,209 to 3,956,309
_3513
PfGW456L13_3514 - Coenzyme PQQ synthesis protein D, at 3,956,329 to 3,956,601
_3514
PfGW456L13_3515 - Pyrroloquinoline-quinone synthase (EC 1.3.3.11), at 3,956,598 to 3,957,350
_3515
Group
Condition
PfGW456L13
_3511
PfGW456L13
_3512
PfGW456L13
_3513
PfGW456L13
_3514
PfGW456L13
_3515
carbon source
L-Malic (C)
-0.1
-2.7
-0.3
N.D.
-0.2
carbon source
D-Galactose (C)
-0.1
+0.3
-0.9
N.D.
-1.0
carbon source
a-Ketoglutaric (C)
-0.2
-1.2
+0.4
N.D.
-0.5
carbon source
D-Galactose (C)
-0.4
-0.3
-0.6
N.D.
-0.3
carbon source
D-Mannose (C)
-0.4
-0.4
-0.4
N.D.
-0.3
carbon source
L-Lactate (C)
-0.3
-0.3
-0.9
N.D.
-0.0
nitrogen source
Putrescine (N)
+0.1
-1.0
-0.4
N.D.
-0.1
carbon source
L-Valine (C)
+0.3
-1.0
-0.5
N.D.
-0.1
nitrogen source
L-Lysine (N)
+0.6
+0.4
-1.2
N.D.
-1.0
carbon source
L-Tryptophan (C)
-0.3
-1.3
+0.3
N.D.
+0.1
carbon source
Trisodium citrate (C)
-0.2
-0.5
-0.3
N.D.
-0.2
carbon source
L-Glutamine (C)
+0.1
-1.2
-0.0
N.D.
-0.1
nitrogen source
Cytosine (N)
-0.2
-1.2
+0.1
N.D.
+0.1
carbon source
L-Arabinose (C)
+0.2
-1.2
+0.1
N.D.
-0.0
nitrogen source
L-Valine (N)
-0.3
-0.8
+0.2
N.D.
-0.0
carbon source
L-Arabinose (C)
+0.1
-0.9
-0.2
N.D.
+0.1
carbon source
D,L-Lactate (C)
+0.4
-0.6
-0.3
N.D.
-0.3
nitrogen source
L-Citrulline (N)
-0.3
-0.4
-0.3
N.D.
+0.3
carbon source
D-Fructose (C)
+0.6
+0.1
-0.6
N.D.
-0.3
carbon source
casaminos (C)
+0.6
-0.4
-0.1
N.D.
+0.1
control
LB control
-0.1
+0.7
+0.2
N.D.
-0.3
carbon source
L-Histidine (C)
+0.5
+0.4
-0.3
N.D.
+0.1
carbon source
D-Lactate (C)
+0.6
-0.2
+0.4
N.D.
+0.3
carbon source
D-Serine (C)
+0.6
+0.6
-0.1
N.D.
+0.1
carbon source
succinate (C)
+0.6
+0.3
+0.3
N.D.
+0.0
carbon source
a-Ketoglutaric (C)
+0.4
+0.5
+0.2
N.D.
+0.2
carbon source
Glycerol (C)
+0.5
+0.6
-0.2
N.D.
+0.3
carbon source
Putrescine (C)
+1.0
+0.4
+0.5
N.D.
-0.3
nitrogen source
L-Arginine (N)
+1.0
+0.8
-0.0
N.D.
-0.1
carbon source
Glycerol (C)
+0.9
+0.6
+0.3
N.D.
+0.3
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