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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_32 and PfGW456L13_33 are separated by 580 nucleotides
PfGW456L13_33 and PfGW456L13_34 are separated by 77 nucleotides
PfGW456L13_34 and PfGW456L13_35 are separated by 108 nucleotides
PfGW456L13_35 and PfGW456L13_36 are separated by 55 nucleotides
PfGW456L13_32 - hypothetical protein, at 38,679 to 39,035
_32
PfGW456L13_33 - hypothetical protein, at 39,616 to 39,771
_33
PfGW456L13_34 - Sensory box histidine kinase, at 39,849 to 42,536
_34
PfGW456L13_35 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 42,645 to 43,208
_35
PfGW456L13_36 - lipoprotein, putative, at 43,264 to 43,872
_36
Group
Condition
PfGW456L13
_32
PfGW456L13
_33
PfGW456L13
_34
PfGW456L13
_35
PfGW456L13
_36
carbon source
a-Ketoglutaric (C)
-1.2
N.D.
+0.0
-0.2
+0.2
carbon source
L-Arabinose (C)
-0.8
N.D.
-0.2
+0.1
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.9
N.D.
+0.1
+0.1
-0.1
control
LB control
-0.5
N.D.
-0.2
-0.1
-0.0
control
LB control
-0.3
N.D.
-0.1
+0.1
-0.4
nitrogen source
L-Threonine (N)
-0.4
N.D.
+0.0
+0.1
-0.4
carbon source
D-Gluconic Acid (C)
-0.2
N.D.
+0.1
-0.3
-0.1
carbon source
D-Glucose (C)
-0.7
N.D.
+0.1
-0.1
+0.0
carbon source
D-Galactose (C)
+0.1
N.D.
-0.2
-0.2
-0.2
carbon source
Glycerol (C)
-0.5
N.D.
-0.2
-0.0
+0.2
carbon source
D-Fructose (C)
-0.7
N.D.
-0.1
+0.3
+0.3
carbon source
L-Valine (C)
-0.6
N.D.
+0.1
+0.2
+0.0
carbon source
D-Glucosamine Hydrochloride (C)
-0.6
N.D.
+0.2
+0.1
+0.2
carbon source
L-Arabinose (C)
-0.1
N.D.
-0.2
+0.1
+0.3
carbon source
L-Tryptophan (C)
+0.5
N.D.
-0.2
+0.1
+0.0
carbon source
L-Valine (C)
+0.4
N.D.
-0.1
+0.1
+0.2
carbon source
octanoate (C)
+0.2
N.D.
-0.0
+0.2
+0.2
nitrogen source
L-Asparagine (N)
+0.1
N.D.
+0.1
+0.1
+0.3
carbon source
succinate (C)
+0.3
N.D.
+0.1
+0.0
+0.2
nitrogen source
Gly-DL-Asp (N)
+0.3
N.D.
+0.2
+0.1
+0.1
carbon source
D-Fructose (C)
+0.5
N.D.
+0.0
+0.3
-0.0
stress
Fusidic 0.08 mg/ml
+0.1
N.D.
+0.1
+0.2
+0.4
nitrogen source
D-Alanine (N)
+0.3
N.D.
+0.2
+0.2
+0.1
carbon source
L-Malic (C)
+0.5
N.D.
+0.0
+0.2
+0.2
carbon source
D-Mannose (C)
+0.5
N.D.
+0.1
+0.2
+0.1
carbon source
D-Lactate (C)
+0.5
N.D.
+0.1
+0.1
+0.4
nitrogen source
L-Glutamic (N)
+0.3
N.D.
+0.2
+0.2
+0.2
carbon source
D-Gluconic Acid (C)
+0.5
N.D.
+0.5
+0.0
+0.1
carbon source
Tween 20 (C)
+0.5
N.D.
+0.1
+0.3
+0.3
carbon source
D,L-Lactate (C)
+0.8
N.D.
+0.2
+0.1
+0.2
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