Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 116 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PfGW456L13_3348 and PfGW456L13_3349 are separated by 112 nucleotides
PfGW456L13_3349 and PfGW456L13_3350 are separated by 103 nucleotides
PfGW456L13_3350 and PfGW456L13_3351 are separated by 74 nucleotides
PfGW456L13_3351 and PfGW456L13_3352 are separated by 1 nucleotides
PfGW456L13_3348 - Transcriptional regulator, at 3,762,361 to 3,763,227
_3348
PfGW456L13_3349 - probable dioxygenase, at 3,763,340 to 3,763,765
_3349
PfGW456L13_3350 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 3,763,869 to 3,764,450
_3350
PfGW456L13_3351 - Putative Isoquinoline 1-oxidoreductase subunit, Mll3835 protein, at 3,764,525 to 3,765,106
_3351
PfGW456L13_3352 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 3,765,108 to 3,767,276
_3352
Group
Condition
PfGW456L13
_3348
PfGW456L13
_3349
PfGW456L13
_3350
PfGW456L13
_3351
PfGW456L13
_3352
carbon source
D-Lactate (C)
-0.5
-0.0
+0.1
-4.1
+0.2
carbon source
D-Gluconic Acid (C)
-2.1
-0.0
+0.5
-1.8
-0.2
carbon source
a-Ketoglutaric (C)
-1.5
-0.3
+0.3
-0.7
+0.0
carbon source
D-Fructose (C)
-0.1
-1.1
+0.2
-1.0
+0.2
control
LB control
+0.1
-0.7
+0.1
-1.0
-0.1
carbon source
D,L-Lactate (C)
-1.2
-0.5
-0.1
+0.5
-0.2
carbon source
L-Arabinose (C)
+0.3
-0.4
+0.1
-1.1
-0.3
nitrogen source
L-Phenylalanine (N)
+0.1
-0.5
-0.4
-0.5
-0.1
carbon source
L-Histidine (C)
+0.1
-0.9
-0.3
-0.3
+0.1
carbon source
D-Glucosamine Hydrochloride (C)
-0.7
+0.3
-0.2
-0.8
+0.2
nitrogen source
L-Threonine (N)
-1.0
-0.5
-0.0
+0.2
-0.0
stress
Cephalothin 3 mg/ml
-0.9
-0.5
+0.0
+0.3
+0.1
carbon source
L-Alanine (C)
-0.7
-0.3
+0.3
+0.0
-0.2
carbon source
D-Mannose (C)
-0.4
-0.5
+0.2
+0.2
-0.3
carbon source
L-Arabinose (C)
-1.1
+0.6
+0.3
-0.4
+0.1
carbon source
Glycerol (C)
-1.2
+0.3
+0.5
-0.1
+0.1
carbon source
D-Galactose (C)
-0.1
+0.5
-0.3
-0.5
+0.2
carbon source
Trisodium citrate (C)
-0.9
+0.6
-0.0
+0.2
-0.0
stress
nitrite 10 mM
+0.6
+0.3
-0.0
-0.5
-0.1
stress
Fusidic 0.08 mg/ml
+0.1
-0.3
-0.3
+0.8
-0.1
nitrogen source
Putrescine (N)
+0.6
-0.5
-0.1
+0.1
+0.3
carbon source
L-Malic (C)
+0.5
+0.4
+0.3
-0.5
-0.2
carbon source
L-Lactate (C)
+1.2
+0.0
-0.1
-0.2
-0.3
nitrogen source
L-Asparagine (N)
+0.5
-0.4
-0.1
+0.6
+0.1
stress
Aluminum chloride 5 mM
+1.0
+0.3
+0.0
-0.5
-0.1
carbon source
L-Alanine (C)
+0.7
+0.4
-0.1
-0.3
+0.1
carbon source
Putrescine (C)
+0.6
+0.4
-0.5
+0.3
+0.2
carbon source
L-Malic (C)
+0.9
+0.7
-0.1
-0.2
-0.0
carbon source
D-Gluconic Acid (C)
+0.1
+1.0
+0.2
+0.4
-0.2
carbon source
L-Valine (C)
+0.7
-0.0
+0.1
+0.7
+0.1
remove
PfGW456L13_3348
plot
remove
PfGW456L13_3349
plot
remove
PfGW456L13_3350
remove
PfGW456L13_3351
plot
remove
PfGW456L13_3352
plot