Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3348 and PfGW456L13_3349 are separated by 112 nucleotidesPfGW456L13_3349 and PfGW456L13_3350 are separated by 103 nucleotidesPfGW456L13_3350 and PfGW456L13_3351 are separated by 74 nucleotidesPfGW456L13_3351 and PfGW456L13_3352 are separated by 1 nucleotides PfGW456L13_3348 - Transcriptional regulator, at 3,762,361 to 3,763,227 _3348 PfGW456L13_3349 - probable dioxygenase, at 3,763,340 to 3,763,765 _3349 PfGW456L13_3350 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 3,763,869 to 3,764,450 _3350 PfGW456L13_3351 - Putative Isoquinoline 1-oxidoreductase subunit, Mll3835 protein, at 3,764,525 to 3,765,106 _3351 PfGW456L13_3352 - Isoquinoline 1-oxidoreductase beta subunit (EC 1.3.99.16), at 3,765,108 to 3,767,276 _3352
Group Condition PfGW456L13_3348 PfGW456L13_3349 PfGW456L13_3350 PfGW456L13_3351 PfGW456L13_3352
carbon source D-Lactate (C) -0.5 -0.0 +0.1 -4.1 +0.2
carbon source D-Gluconic Acid (C) -2.1 -0.0 +0.5 -1.8 -0.2
carbon source a-Ketoglutaric (C) -1.5 -0.3 +0.3 -0.7 +0.0
carbon source D-Fructose (C) -0.1 -1.1 +0.2 -1.0 +0.2
control LB control +0.1 -0.7 +0.1 -1.0 -0.1
carbon source D,L-Lactate (C) -1.2 -0.5 -0.1 +0.5 -0.2
carbon source L-Arabinose (C) +0.3 -0.4 +0.1 -1.1 -0.3
nitrogen source L-Phenylalanine (N) +0.1 -0.5 -0.4 -0.5 -0.1
carbon source L-Histidine (C) +0.1 -0.9 -0.3 -0.3 +0.1
carbon source D-Glucosamine Hydrochloride (C) -0.7 +0.3 -0.2 -0.8 +0.2
nitrogen source L-Threonine (N) -1.0 -0.5 -0.0 +0.2 -0.0
stress Cephalothin 3 mg/ml -0.9 -0.5 +0.0 +0.3 +0.1
carbon source L-Alanine (C) -0.7 -0.3 +0.3 +0.0 -0.2
carbon source D-Mannose (C) -0.4 -0.5 +0.2 +0.2 -0.3
carbon source L-Arabinose (C) -1.1 +0.6 +0.3 -0.4 +0.1
carbon source Glycerol (C) -1.2 +0.3 +0.5 -0.1 +0.1
carbon source D-Galactose (C) -0.1 +0.5 -0.3 -0.5 +0.2
carbon source Trisodium citrate (C) -0.9 +0.6 -0.0 +0.2 -0.0
stress nitrite 10 mM +0.6 +0.3 -0.0 -0.5 -0.1
stress Fusidic 0.08 mg/ml +0.1 -0.3 -0.3 +0.8 -0.1
nitrogen source Putrescine (N) +0.6 -0.5 -0.1 +0.1 +0.3
carbon source L-Malic (C) +0.5 +0.4 +0.3 -0.5 -0.2
carbon source L-Lactate (C) +1.2 +0.0 -0.1 -0.2 -0.3
nitrogen source L-Asparagine (N) +0.5 -0.4 -0.1 +0.6 +0.1
stress Aluminum chloride 5 mM +1.0 +0.3 +0.0 -0.5 -0.1
carbon source L-Alanine (C) +0.7 +0.4 -0.1 -0.3 +0.1
carbon source Putrescine (C) +0.6 +0.4 -0.5 +0.3 +0.2
carbon source L-Malic (C) +0.9 +0.7 -0.1 -0.2 -0.0
carbon source D-Gluconic Acid (C) +0.1 +1.0 +0.2 +0.4 -0.2
carbon source L-Valine (C) +0.7 -0.0 +0.1 +0.7 +0.1
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