Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 116 experiments or choose conditions or try the comparative fitness browser

500 ntPfGW456L13_3339 and PfGW456L13_3340 are separated by 65 nucleotidesPfGW456L13_3340 and PfGW456L13_3341 are separated by 99 nucleotidesPfGW456L13_3341 and PfGW456L13_3342 are separated by 198 nucleotidesPfGW456L13_3342 and PfGW456L13_3343 overlap by 4 nucleotides PfGW456L13_3339 - FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-), at 3,750,665 to 3,751,423 _3339 PfGW456L13_3340 - Hydroxyacylglutathione hydrolase (EC 3.1.2.6), at 3,751,489 to 3,752,256 _3340 PfGW456L13_3341 - Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-), at 3,752,356 to 3,753,786 _3341 PfGW456L13_3342 - Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1), at 3,753,985 to 3,755,817 _3342 PfGW456L13_3343 - ABC transporter, periplasmic substrate-binding protein, at 3,755,814 to 3,757,655 _3343
Group Condition PfGW456L13_3339 PfGW456L13_3340 PfGW456L13_3341 PfGW456L13_3342 PfGW456L13_3343
stress Vancomycin 0.5 mg/ml +0.1 -0.2 -1.9 -0.4 -0.3
carbon source D-Alanine (C) -1.4 -0.2 -0.2 +0.0 +0.1
stress Bacitracin 1 mg/ml -0.1 -0.1 -1.0 -0.1 -0.3
stress Vancomycin 0.25 mg/ml -0.0 -0.2 -1.2 -0.2 +0.0
carbon source Putrescine (C) -0.9 -0.1 -0.1 +0.1 -0.6
carbon source Trisodium citrate (C) -1.6 -0.2 +0.4 +0.0 +0.0
nitrogen source L-Isoleucine (N) -1.3 -0.1 -0.1 -0.0 +0.2
carbon source L-Lactate (C) -0.9 -0.1 -0.3 -0.0 +0.2
stress Vancomycin 0.125 mg/ml +0.1 -0.1 -0.9 -0.1 +0.0
carbon source L-Arabinose (C) -0.6 -0.2 -0.3 -0.1 +0.1
stress Dimethyl Sulfoxide 7.5 vol% +0.2 -0.1 -0.9 -0.1 -0.2
carbon source D-Gluconic Acid (C) +0.4 -0.0 -0.7 +0.0 -0.5
nitrogen source L-Lysine (N) -0.5 -0.3 +0.2 -0.1 -0.2
nitrogen source Gly-DL-Asp (N) -0.8 +0.1 +0.3 -0.0 -0.2
carbon source L-Arabinose (C) -1.1 -0.4 +0.5 -0.0 +0.3
carbon source D-Fructose (C) -1.2 +0.0 +0.1 +0.2 +0.2
nitrogen source L-Phenylalanine (N) -0.5 -0.1 -0.4 +0.1 +0.4
carbon source succinate (C) -0.7 -0.1 -0.3 +0.1 +0.4
carbon source D-Mannose (C) -0.6 -0.1 +0.1 +0.2 +0.2
carbon source L-Malic (C) -0.4 -0.2 -0.1 +0.1 +0.4
carbon source D-Lactate (C) +0.1 -0.2 -0.6 +0.2 +0.4
nitrogen source D-Serine (N) +1.0 -0.5 -0.7 +0.1 -0.0
carbon source L-Tryptophan (C) +0.5 -0.5 -0.2 +0.1 +0.1
carbon source D-Glucose (C) +0.3 -0.3 -0.5 +0.2 +0.3
carbon source L-Histidine (C) +0.9 -0.2 -0.7 +0.0 +0.1
carbon source D-Gluconic Acid (C) +0.6 -0.2 +0.1 +0.0 -0.3
nitrogen source L-Arginine (N) +0.9 -0.2 -0.2 +0.1 -0.1
carbon source L-Histidine (C) +0.8 -0.2 -0.3 +0.1 +0.1
stress Lomefloxacin 0.0004 mM -0.4 +0.8 +2.2 +0.5 +0.4
carbon source octanoate (C) +0.2 -0.4 +3.6 +1.4 +1.0
remove
PfGW456L13_3339
plot
remove
PfGW456L13_3340
plot
remove
PfGW456L13_3341
remove
PfGW456L13_3342
plot
remove
PfGW456L13_3343
plot