Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3307 and PfGW456L13_3308 overlap by 4 nucleotidesPfGW456L13_3308 and PfGW456L13_3309 overlap by 4 nucleotidesPfGW456L13_3309 and PfGW456L13_3310 are separated by 116 nucleotidesPfGW456L13_3310 and PfGW456L13_3311 overlap by 4 nucleotides PfGW456L13_3307 - Exonuclease SbcD, at 3,716,195 to 3,717,439 _3307 PfGW456L13_3308 - Exonuclease SbcC, at 3,717,436 to 3,721,077 _3308 PfGW456L13_3309 - Glutathione S-transferase family protein, at 3,721,074 to 3,721,670 _3309 PfGW456L13_3310 - hypothetical protein, at 3,721,787 to 3,722,044 _3310 PfGW456L13_3311 - hypothetical protein, at 3,722,041 to 3,722,253 _3311
Group Condition PfGW456L13_3307 PfGW456L13_3308 PfGW456L13_3309 PfGW456L13_3310 PfGW456L13_3311
stress Lomefloxacin 0.0004 mM -2.1 -2.5 +0.1 N.D. -1.3
carbon source octanoate (C) -0.4 -0.2 -2.1 N.D. -2.0
carbon source D-Galactose (C) -0.7 +0.2 -1.6 N.D. -1.7
carbon source D-Fructose (C) -0.2 -0.3 -1.7 N.D. -1.4
stress Cisplatin 0.0125 mg/ml -1.4 -1.1 +0.6 N.D. -0.2
nitrogen source Gly-Glu (N) +0.0 -0.2 -0.9 N.D. -0.9
carbon source Putrescine (C) -0.1 +0.6 -0.2 N.D. -2.0
nitrogen source L-Alanine (N) -0.1 -0.1 -1.2 N.D. -0.2
stress sodium fluoride 12.5 mM -0.5 -0.3 +0.2 N.D. -1.0
stress D-Cycloserine 0.125 mg/ml -0.4 +0.1 -0.4 N.D. -0.9
stress nitrate 200 mM -0.5 -0.3 +0.2 N.D. -1.0
nitrogen source nitrate (N) -0.0 +0.3 -0.5 N.D. -1.0
carbon source L-Malic (C) -0.3 -0.0 -2.0 N.D. +1.1
carbon source L-Glutamine (C) +0.0 +0.1 +0.5 N.D. -1.6
carbon source L-Tryptophan (C) -0.3 -0.2 +0.5 N.D. -0.9
carbon source D-Glucose (C) -0.1 +0.5 -0.2 N.D. -1.1
carbon source Glycerol (C) -0.2 -0.4 -0.6 N.D. +0.5
carbon source succinate (C) -0.5 +0.2 +0.4 N.D. -0.6
carbon source L-Alanine (C) -0.2 -0.4 +0.8 N.D. -0.6
carbon source a-Ketoglutaric (C) -0.7 -0.5 +0.5 N.D. +0.5
nitrogen source Ammonium chloride (N) +0.2 -0.0 +1.0 N.D. -1.2
lb LB -0.5 -0.1 -0.2 N.D. +0.9
carbon source D-Serine (C) -0.6 +0.4 +0.5 N.D. -0.3
carbon source Glycerol (C) -0.3 +0.2 -0.5 N.D. +0.8
carbon source L-Arabinose (C) -0.4 +0.3 -0.4 N.D. +0.7
carbon source L-Malic (C) +0.1 +0.2 +0.9 N.D. -0.9
carbon source D-Fructose (C) -0.4 +0.2 -0.5 N.D. +1.0
carbon source L-Lactate (C) +0.3 +0.1 -0.6 N.D. +0.7
carbon source a-Ketoglutaric (C) +0.6 -0.7 +0.2 N.D. +0.6
stress Vancomycin 0.5 mg/ml -0.3 -0.2 +1.0 N.D. +0.2
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