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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3245 and PfGW456L13_3246 are separated by 54 nucleotides
PfGW456L13_3246 and PfGW456L13_3247 overlap by 4 nucleotides
PfGW456L13_3247 and PfGW456L13_3248 overlap by 4 nucleotides
PfGW456L13_3248 and PfGW456L13_3249 are separated by 21 nucleotides
PfGW456L13_3245 - Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21), at 3,635,560 to 3,637,143
_3245
PfGW456L13_3246 - Malto-oligosyltrehalose trehalohydrolase (EC 3.2.1.141), at 3,637,198 to 3,638,952
_3246
PfGW456L13_3247 - 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25), at 3,638,949 to 3,641,027
_3247
PfGW456L13_3248 - Malto-oligosyltrehalose synthase (EC 5.4.99.15), at 3,641,024 to 3,643,819
_3248
PfGW456L13_3249 - FIG00953356: hypothetical protein, at 3,643,841 to 3,644,158
_3249
Group
Condition
PfGW456L13
_3245
PfGW456L13
_3246
PfGW456L13
_3247
PfGW456L13
_3248
PfGW456L13
_3249
nitrogen source
L-Valine (N)
-0.9
-0.1
+0.1
-0.3
N.D.
nitrogen source
Gly-Glu (N)
-0.2
-0.3
-0.1
-0.3
N.D.
nitrogen source
NAG (N)
-0.1
-0.1
-0.3
-0.1
N.D.
control
LB control
-0.2
-0.3
+0.2
-0.2
N.D.
carbon source
L-Tryptophan (C)
+0.2
-0.4
-0.1
-0.1
N.D.
nitrogen source
L-Leucine (N)
-0.4
+0.1
+0.1
-0.2
N.D.
carbon source
a-Ketoglutaric (C)
+0.3
-0.2
-0.3
-0.1
N.D.
control
LB control
-0.1
-0.2
+0.2
-0.1
N.D.
carbon source
Glycerol (C)
+0.0
-0.3
-0.2
+0.2
N.D.
carbon source
D-Galactose (C)
+0.4
-0.0
-0.4
-0.1
N.D.
carbon source
D-Glucose (C)
-0.1
+0.3
-0.2
-0.1
N.D.
nitrogen source
L-Asparagine (N)
-0.3
+0.3
-0.0
-0.1
N.D.
carbon source
D-Gluconic Acid (C)
-0.4
+0.3
+0.2
+0.0
N.D.
carbon source
L-Malic (C)
+0.2
+0.1
-0.4
+0.2
N.D.
carbon source
octanoate (C)
-0.1
+0.5
-0.0
+0.1
N.D.
carbon source
casaminos (C)
+0.3
+0.4
-0.1
+0.1
N.D.
carbon source
Glycerol (C)
+0.2
+0.3
+0.1
+0.0
N.D.
carbon source
D,L-Lactate (C)
+0.3
+0.3
+0.2
-0.1
N.D.
carbon source
a-Ketoglutaric (C)
+0.5
+0.3
-0.0
-0.0
N.D.
carbon source
L-Phenylalanine (C)
+0.4
+0.4
-0.1
+0.0
N.D.
carbon source
D-Alanine (C)
+0.3
+0.3
+0.0
+0.1
N.D.
carbon source
L-Arabinose (C)
+0.2
+0.2
+0.4
-0.0
N.D.
carbon source
L-Alanine (C)
+0.2
+0.1
+0.3
+0.2
N.D.
carbon source
D-Galactose (C)
+0.3
+0.4
-0.1
+0.1
N.D.
carbon source
D-Mannose (C)
+0.4
+0.2
+0.2
+0.0
N.D.
carbon source
D-Glucosamine Hydrochloride (C)
+0.5
+0.4
-0.0
-0.1
N.D.
carbon source
D-Alanine (C)
+0.3
+0.3
+0.1
+0.2
N.D.
carbon source
L-Valine (C)
+0.4
+0.2
+0.1
+0.2
N.D.
carbon source
D-Fructose (C)
+0.6
+0.6
-0.2
+0.4
N.D.
carbon source
L-Valine (C)
+0.6
+0.5
+0.0
+0.2
N.D.
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