Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_320 and PfGW456L13_321 are separated by 119 nucleotidesPfGW456L13_321 and PfGW456L13_322 are separated by 150 nucleotidesPfGW456L13_322 and PfGW456L13_323 overlap by 4 nucleotidesPfGW456L13_323 and PfGW456L13_324 are separated by 70 nucleotides PfGW456L13_320 - Histidine ammonia-lyase (EC 4.3.1.3) (from data), at 373,769 to 375,301 _320 PfGW456L13_321 - Histidine ammonia-lyase (EC 4.3.1.3), at 375,421 to 376,944 _321 PfGW456L13_322 - Histidine ABC transporter, ATP-binding protein (TC 3.A.1), at 377,095 to 377,925 _322 PfGW456L13_323 - Histidine ABC transporter, permease protein (TC 3.A.1), at 377,922 to 378,773 _323 PfGW456L13_324 - Histidine ABC transporter, histidine-binding protein (TC 3.A.1), at 378,844 to 379,812 _324
Group Condition PfGW456L13_320 PfGW456L13_321 PfGW456L13_322 PfGW456L13_323 PfGW456L13_324
carbon source L-Histidine (C) -4.5 +0.3 -0.4 +0.3 -0.4
carbon source L-Tryptophan (C) +0.2 -0.9 -1.9 -1.4 -0.6
nitrogen source L-Histidine (N) -2.3 +0.1 -0.1 +0.1 -0.3
nitrogen source L-Serine (N) +0.1 -0.4 -0.9 -1.0 -0.3
carbon source L-Tryptophan (C) +0.2 -0.5 -1.4 -0.3 -0.2
carbon source L-Phenylalanine (C) -0.0 -0.3 -0.9 -0.8 -0.2
carbon source D-Glucose (C) -0.0 -0.0 -1.0 -1.1 +0.2
nitrogen source Gly-Glu (N) -0.5 -0.2 -0.3 -0.6 -0.1
carbon source Trisodium citrate (C) -0.3 -0.4 -0.3 -0.4 -0.3
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x -0.3 -0.4 -0.7 -0.2 -0.2
nitrogen source Gly-DL-Asp (N) -0.1 +0.3 -0.8 -0.4 -0.4
stress Vancomycin 0.125 mg/ml +0.1 -0.1 -0.7 -0.6 +0.0
carbon source D-Glucosamine Hydrochloride (C) -0.4 -0.5 +0.4 -0.6 -0.3
carbon source D-Gluconic Acid (C) -0.9 -0.3 -0.3 +0.1 +0.0
carbon source D-Lactate (C) -0.7 -0.2 -0.6 +0.2 +0.0
stress Aluminum chloride 5 mM +0.0 -0.2 -1.5 +0.4 +0.2
stress D-Cycloserine 0.125 mg/ml -1.0 -0.5 +0.4 -0.0 +0.0
carbon source octanoate (C) +0.3 -1.3 +1.2 -0.3 -0.8
carbon source D-Alanine (C) +0.3 -0.5 +0.2 -0.8 +0.1
carbon source L-Arabinose (C) -0.1 -0.3 +0.4 -0.7 +0.1
carbon source Putrescine (C) -0.3 -0.5 +0.3 -0.2 +0.2
carbon source Glycerol (C) +0.6 -0.0 -0.3 -0.8 +0.1
carbon source D-Lactate (C) -0.3 -0.1 +0.8 -0.4 -0.1
stress A22 0.04 mg/ml -0.5 +0.1 +0.7 -0.2 +0.2
carbon source L-Alanine (C) +0.3 +0.3 -0.5 +0.5 +0.1
nitrogen source Glycine (N) +0.0 +0.3 +0.2 +0.8 +0.4
carbon source L-Alanine (C) +0.5 +0.5 +0.2 +0.4 +0.2
carbon source L-Asparagine (C) +0.5 +0.5 +0.6 +0.5 +0.4
carbon source L-Asparagine (C) +0.2 +0.4 +0.9 +0.6 +0.4
carbon source L-Histidine (C) -5.7 +1.7 +4.0 +2.6 +1.9
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