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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3199 and PfGW456L13_3200 are separated by 514 nucleotides
PfGW456L13_3200 and PfGW456L13_3201 are separated by 9 nucleotides
PfGW456L13_3201 and PfGW456L13_3202 are separated by 2 nucleotides
PfGW456L13_3202 and PfGW456L13_3203 are separated by 3 nucleotides
PfGW456L13_3199 - hypothetical protein, at 3,580,796 to 3,581,275
_3199
PfGW456L13_3200 - NAD(P)H oxidoreductase YRKL (EC 1.6.99.-) @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2, at 3,581,790 to 3,582,500
_3200
PfGW456L13_3201 - Alpha-glucoside transport ATP-binding protein AglK, at 3,582,510 to 3,584,156
_3201
PfGW456L13_3202 - Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1), at 3,584,159 to 3,584,986
_3202
PfGW456L13_3203 - Nucleoside ABC transporter, permease protein 1, at 3,584,990 to 3,585,949
_3203
Group
Condition
PfGW456L13
_3199
PfGW456L13
_3200
PfGW456L13
_3201
PfGW456L13
_3202
PfGW456L13
_3203
carbon source
D-Galactose (C)
+0.0
+0.1
-0.4
-1.5
-0.9
carbon source
L-Glutamine (C)
-0.2
+0.2
+0.0
-2.5
+0.1
carbon source
a-Ketoglutaric (C)
+0.0
+0.0
+0.1
-0.4
-1.1
carbon source
L-Tryptophan (C)
-0.0
-0.2
+0.0
-0.8
-0.3
control
LB control
+0.0
+0.0
-0.3
-1.0
+0.1
stress
nitrate 200 mM
+0.1
+0.1
-0.1
-0.7
-0.1
carbon source
L-Valine (C)
+0.2
+0.1
-0.1
-0.9
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.1
-0.2
+0.2
+0.0
-0.6
carbon source
L-Malic (C)
-0.1
+0.0
+0.3
-0.3
-0.3
nitrogen source
L-Asparagine (N)
+0.2
+0.1
+0.0
-0.6
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
-0.3
-0.1
+0.4
-0.2
carbon source
octanoate (C)
+0.1
+0.2
+0.4
-0.8
-0.1
stress
nitrite 10 mM
-0.0
+0.2
+0.1
-0.6
+0.2
stress
Vancomycin 0.5 mg/ml
-0.1
+0.1
+0.1
+0.4
-0.5
carbon source
D-Galactose (C)
+0.2
+0.1
+0.1
-0.6
+0.4
carbon source
Glycerol (C)
-0.2
+0.3
-0.2
+0.1
+0.4
carbon source
L-Histidine (C)
-0.1
+0.1
-0.1
+0.7
-0.3
stress
Vancomycin 0.25 mg/ml
-0.0
+0.2
+0.2
-0.4
+0.5
stress
Lomefloxacin 0.0004 mM
-0.6
+0.0
-0.0
+0.6
+0.4
carbon source
Glycerol (C)
-0.3
-0.1
+0.2
+0.5
+0.0
stress
Benzethonium chloride 0.0125 mM
+0.1
+0.2
-0.1
-0.2
+0.5
carbon source
L-Alanine (C)
-0.0
+0.1
+0.2
+0.5
-0.3
carbon source
D-Glucose (C)
+0.2
+0.1
+0.2
-0.3
+0.4
carbon source
a-Ketoglutaric (C)
+0.3
-0.2
+0.1
+0.4
+0.1
stress
A22 0.04 mg/ml
-0.0
+0.0
+0.3
+0.6
-0.1
carbon source
D-Gluconic Acid (C)
+0.1
+0.2
+0.0
+0.9
-0.3
carbon source
L-Asparagine (C)
+0.1
+0.1
+0.0
+0.8
-0.2
carbon source
Trisodium citrate (C)
+0.4
-0.2
-0.1
+0.6
+0.2
carbon source
D,L-Lactate (C)
+0.2
+0.4
-0.1
+0.5
+0.0
carbon source
L-Lactate (C)
-0.1
+0.2
+0.2
+1.1
-0.3
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