Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3184 and PfGW456L13_3185 are separated by 33 nucleotidesPfGW456L13_3185 and PfGW456L13_3186 are separated by 105 nucleotidesPfGW456L13_3186 and PfGW456L13_3187 are separated by 218 nucleotidesPfGW456L13_3187 and PfGW456L13_3188 are separated by 54 nucleotides PfGW456L13_3184 - Putative tRNA-m1A22 methylase, at 3,564,154 to 3,564,927 _3184 PfGW456L13_3185 - Threonine dehydratase (EC 4.3.1.19), at 3,564,961 to 3,565,917 _3185 PfGW456L13_3186 - Transcriptional regulator, AraC family, at 3,566,023 to 3,566,892 _3186 PfGW456L13_3187 - ABC-type uncharacterized transport system, ATPase component, at 3,567,111 to 3,567,626 _3187 PfGW456L13_3188 - Transcriptional regulator, AraC family, at 3,567,681 to 3,568,349 _3188
Group Condition PfGW456L13_3184 PfGW456L13_3185 PfGW456L13_3186 PfGW456L13_3187 PfGW456L13_3188
carbon source Putrescine (C) -0.4 -0.6 -0.6 +0.1 -0.5
carbon source a-Ketoglutaric (C) +0.1 +0.0 -0.5 +0.1 -1.4
stress D-Cycloserine 0.125 mg/ml -0.5 +0.0 -0.3 -0.1 -0.2
carbon source L-Arabinose (C) -0.3 -0.5 +0.4 -0.4 -0.2
carbon source D-Galactose (C) +0.1 -0.2 +0.1 +0.1 -0.9
carbon source L-Tryptophan (C) -0.2 +0.0 +0.2 -0.2 -0.5
carbon source L-Lactate (C) +0.1 -0.0 +0.3 -0.3 -0.5
carbon source D-Alanine (C) -0.2 -0.3 +0.3 +0.2 -0.3
carbon source a-Ketoglutaric (C) +0.2 -0.2 +0.2 -0.3 -0.3
nitrogen source Putrescine (N) -0.3 +0.2 +0.1 -0.3 +0.2
carbon source succinate (C) +0.1 -0.0 +0.3 +0.1 -0.5
carbon source D-Glucose (C) +0.4 +0.2 +0.0 -0.2 -0.4
carbon source D-Glucosamine Hydrochloride (C) +0.5 +0.1 +0.0 +0.1 -0.5
nitrogen source L-Lysine (N) +0.3 +0.0 +0.4 -0.2 -0.2
stress Lomefloxacin 0.0004 mM +0.2 -0.3 +0.6 -0.4 +0.3
carbon source Glycerol (C) +0.5 +0.2 +0.1 -0.1 -0.3
stress Fusidic 0.08 mg/ml -0.3 +0.1 +0.2 +0.1 +0.3
nitrogen source Ammonium chloride (N) +0.2 +0.3 +0.4 -0.1 -0.1
carbon source D-Fructose (C) -0.2 +0.1 +0.0 +0.3 +0.6
carbon source D-Fructose (C) +0.3 +0.1 +0.6 -0.4 +0.2
nitrogen source D-Alanine (N) +0.1 +0.2 +0.4 -0.2 +0.4
carbon source D-Gluconic Acid (C) +0.0 -0.1 +0.2 +0.3 +0.4
nitrogen source L-Glutamine (N) +0.4 +0.1 +0.4 -0.3 +0.3
nitrogen source L-Threonine (N) +0.2 +0.2 +0.4 -0.3 +0.4
nitrogen source L-Isoleucine (N) -0.0 +0.3 +0.4 -0.1 +0.3
carbon source L-Malic (C) +0.1 +0.1 +0.3 -0.0 +0.6
carbon source D-Lactate (C) +0.2 +0.4 +0.3 +0.3 -0.1
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.5 +0.1 +0.2 +0.2 +0.2
nitrogen source L-Proline (N) +0.4 +0.3 +0.4 -0.1 +0.2
carbon source octanoate (C) +0.5 +0.4 +0.3 -0.0 +0.8
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