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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3184 and PfGW456L13_3185 are separated by 33 nucleotides
PfGW456L13_3185 and PfGW456L13_3186 are separated by 105 nucleotides
PfGW456L13_3186 and PfGW456L13_3187 are separated by 218 nucleotides
PfGW456L13_3187 and PfGW456L13_3188 are separated by 54 nucleotides
PfGW456L13_3184 - Putative tRNA-m1A22 methylase, at 3,564,154 to 3,564,927
_3184
PfGW456L13_3185 - Threonine dehydratase (EC 4.3.1.19), at 3,564,961 to 3,565,917
_3185
PfGW456L13_3186 - Transcriptional regulator, AraC family, at 3,566,023 to 3,566,892
_3186
PfGW456L13_3187 - ABC-type uncharacterized transport system, ATPase component, at 3,567,111 to 3,567,626
_3187
PfGW456L13_3188 - Transcriptional regulator, AraC family, at 3,567,681 to 3,568,349
_3188
Group
Condition
PfGW456L13
_3184
PfGW456L13
_3185
PfGW456L13
_3186
PfGW456L13
_3187
PfGW456L13
_3188
carbon source
Putrescine (C)
-0.4
-0.6
-0.6
+0.1
-0.5
carbon source
a-Ketoglutaric (C)
+0.1
+0.0
-0.5
+0.1
-1.4
stress
D-Cycloserine 0.125 mg/ml
-0.5
+0.0
-0.3
-0.1
-0.2
carbon source
L-Arabinose (C)
-0.3
-0.5
+0.4
-0.4
-0.2
carbon source
D-Galactose (C)
+0.1
-0.2
+0.1
+0.1
-0.9
carbon source
L-Tryptophan (C)
-0.2
+0.0
+0.2
-0.2
-0.5
carbon source
L-Lactate (C)
+0.1
-0.0
+0.3
-0.3
-0.5
carbon source
D-Alanine (C)
-0.2
-0.3
+0.3
+0.2
-0.3
carbon source
a-Ketoglutaric (C)
+0.2
-0.2
+0.2
-0.3
-0.3
nitrogen source
Putrescine (N)
-0.3
+0.2
+0.1
-0.3
+0.2
carbon source
succinate (C)
+0.1
-0.0
+0.3
+0.1
-0.5
carbon source
D-Glucose (C)
+0.4
+0.2
+0.0
-0.2
-0.4
carbon source
D-Glucosamine Hydrochloride (C)
+0.5
+0.1
+0.0
+0.1
-0.5
nitrogen source
L-Lysine (N)
+0.3
+0.0
+0.4
-0.2
-0.2
stress
Lomefloxacin 0.0004 mM
+0.2
-0.3
+0.6
-0.4
+0.3
carbon source
Glycerol (C)
+0.5
+0.2
+0.1
-0.1
-0.3
stress
Fusidic 0.08 mg/ml
-0.3
+0.1
+0.2
+0.1
+0.3
nitrogen source
Ammonium chloride (N)
+0.2
+0.3
+0.4
-0.1
-0.1
carbon source
D-Fructose (C)
-0.2
+0.1
+0.0
+0.3
+0.6
carbon source
D-Fructose (C)
+0.3
+0.1
+0.6
-0.4
+0.2
nitrogen source
D-Alanine (N)
+0.1
+0.2
+0.4
-0.2
+0.4
carbon source
D-Gluconic Acid (C)
+0.0
-0.1
+0.2
+0.3
+0.4
nitrogen source
L-Glutamine (N)
+0.4
+0.1
+0.4
-0.3
+0.3
nitrogen source
L-Threonine (N)
+0.2
+0.2
+0.4
-0.3
+0.4
nitrogen source
L-Isoleucine (N)
-0.0
+0.3
+0.4
-0.1
+0.3
carbon source
L-Malic (C)
+0.1
+0.1
+0.3
-0.0
+0.6
carbon source
D-Lactate (C)
+0.2
+0.4
+0.3
+0.3
-0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.5
+0.1
+0.2
+0.2
+0.2
nitrogen source
L-Proline (N)
+0.4
+0.3
+0.4
-0.1
+0.2
carbon source
octanoate (C)
+0.5
+0.4
+0.3
-0.0
+0.8
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