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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_316 and PfGW456L13_317 are separated by 10 nucleotides
PfGW456L13_317 and PfGW456L13_318 are separated by 17 nucleotides
PfGW456L13_318 and PfGW456L13_319 overlap by 48 nucleotides
PfGW456L13_319 and PfGW456L13_320 overlap by 11 nucleotides
PfGW456L13_316 - N-formylglutamate deformylase (EC 3.5.1.68)
(from data)
, at 370,216 to 371,019
_316
PfGW456L13_317 - Imidazolonepropionase (EC 3.5.2.7)
(from data)
, at 371,030 to 372,235
_317
PfGW456L13_318 - Histidine transport protein (permease), at 372,253 to 373,659
_318
PfGW456L13_319 - hypothetical protein, at 373,612 to 373,779
_319
PfGW456L13_320 - Histidine ammonia-lyase (EC 4.3.1.3)
(from data)
, at 373,769 to 375,301
_320
Group
Condition
PfGW456L13
_316
PfGW456L13
_317
PfGW456L13
_318
PfGW456L13
_319
PfGW456L13
_320
carbon source
L-Histidine (C)
-5.7
-5.7
-3.5
+1.0
-4.5
carbon source
L-Histidine (C)
-4.4
-4.6
-0.4
+2.3
-5.7
nitrogen source
L-Histidine (N)
-4.8
-3.7
-0.8
+0.4
-2.3
carbon source
octanoate (C)
-1.2
+0.3
-0.1
-2.0
+0.3
carbon source
D-Gluconic Acid (C)
+0.1
-0.9
+0.1
-1.0
-0.9
stress
D-Cycloserine 0.125 mg/ml
-0.1
+0.1
+0.0
-0.7
-1.0
carbon source
D-Lactate (C)
+0.2
-0.4
-0.1
-0.5
-0.7
carbon source
D-Fructose (C)
-0.4
-0.3
-0.4
-0.7
+0.2
carbon source
D-Glucosamine Hydrochloride (C)
-0.0
+0.1
-0.0
-1.0
-0.4
carbon source
Trisodium citrate (C)
+0.1
-0.2
+0.1
-0.9
-0.3
stress
Lomefloxacin 0.0004 mM
+0.0
-0.2
-0.2
-0.7
-0.2
carbon source
L-Lactate (C)
-0.3
-0.1
+0.2
-1.0
+0.1
carbon source
D-Fructose (C)
-0.1
+0.3
-0.1
-0.6
-0.6
stress
Thallium(I) acetate 0.008 mg/ml
+0.1
-0.1
+0.1
-0.7
-0.4
stress
Cisplatin 0.0125 mg/ml
+0.1
+0.1
-0.1
-0.7
-0.2
stress
Bacitracin 1 mg/ml
+0.1
+0.1
-0.0
-0.7
-0.3
carbon source
a-Ketoglutaric (C)
+0.1
+0.2
+0.1
-0.8
-0.3
nitrogen source
Ammonium chloride (N)
-0.0
-0.2
-0.1
-0.5
+0.3
carbon source
D-Lactate (C)
-0.1
+0.3
-0.0
-0.6
-0.3
carbon source
L-Tryptophan (C)
+0.0
+0.2
+0.1
-1.2
+0.2
carbon source
casaminos (C)
-0.4
-0.5
+0.0
+0.6
-0.0
carbon source
D-Glucose (C)
+0.1
+0.4
-0.2
-0.6
-0.0
carbon source
succinate (C)
+0.3
+0.0
+0.3
-1.0
+0.3
carbon source
Glycerol (C)
+0.0
-0.0
-0.1
-0.6
+0.6
carbon source
D,L-Lactate (C)
-0.0
+0.1
-0.6
+0.3
+0.3
carbon source
a-Ketoglutaric (C)
+0.2
-0.6
+0.1
+0.5
-0.1
carbon source
D-Galactose (C)
-0.2
+0.2
-0.3
+0.4
+0.2
carbon source
L-Asparagine (C)
+0.0
-0.1
-0.0
+0.7
+0.5
nitrogen source
Glycine (N)
-0.0
+0.2
-0.1
+1.3
+0.0
stress
Nickel (II) chloride 1 mM
+0.1
+0.1
+0.0
+1.4
+0.7
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