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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3079 and PfGW456L13_3080 are separated by 14 nucleotides
PfGW456L13_3080 and PfGW456L13_3081 are separated by 154 nucleotides
PfGW456L13_3081 and PfGW456L13_3082 are separated by 23 nucleotides
PfGW456L13_3082 and PfGW456L13_3083 are separated by 102 nucleotides
PfGW456L13_3079 - ABC-type protease exporter, membrane fusion protein (MFP) family component PrtE/AprE, at 3,426,651 to 3,428,000
_3079
PfGW456L13_3080 - ABC-type protease exporter, outer membrane component PrtF/AprF, at 3,428,015 to 3,429,370
_3080
PfGW456L13_3081 - Serine protease homologue, at 3,429,525 to 3,432,572
_3081
PfGW456L13_3082 - Lipase (EC 3.1.1.3), at 3,432,596 to 3,434,296
_3082
PfGW456L13_3083 - Lipase (EC 3.1.1.3), at 3,434,399 to 3,436,252
_3083
Group
Condition
PfGW456L13
_3079
PfGW456L13
_3080
PfGW456L13
_3081
PfGW456L13
_3082
PfGW456L13
_3083
carbon source
D-Gluconic Acid (C)
-0.2
-0.2
+0.0
-0.2
-0.3
carbon source
D-Fructose (C)
-0.2
-0.6
-0.1
-0.1
+0.1
nitrogen source
L-Leucine (N)
-0.3
-0.3
-0.1
-0.0
-0.2
carbon source
a-Ketoglutaric (C)
-0.4
-0.2
-0.1
-0.2
+0.1
carbon source
Trisodium citrate (C)
-0.3
-0.4
-0.0
-0.0
-0.0
carbon source
octanoate (C)
-0.1
-0.4
-0.1
+0.0
+0.0
carbon source
D-Galactose (C)
-0.2
-0.1
-0.2
-0.1
+0.1
carbon source
D-Gluconic Acid (C)
+0.2
-0.3
-0.1
-0.3
+0.0
stress
Fusidic 0.03 mg/ml
-0.1
-0.1
+0.1
+0.0
-0.2
nitrogen source
Cytosine (N)
-0.2
-0.1
+0.1
-0.0
-0.1
carbon source
L-Malic (C)
-0.2
-0.1
-0.0
+0.2
-0.2
stress
Cisplatin 0.0125 mg/ml
-0.1
-0.1
+0.1
-0.2
+0.1
control
LB control
-0.2
+0.0
-0.0
-0.2
+0.1
stress
Vancomycin 0.5 mg/ml
+0.2
-0.1
-0.1
-0.0
-0.2
carbon source
D-Galactose (C)
+0.3
-0.4
+0.1
-0.1
+0.1
stress
Thallium(I) acetate 0.008 mg/ml
-0.2
-0.1
-0.0
-0.1
+0.2
carbon source
D-Lactate (C)
+0.0
-0.4
-0.1
+0.1
+0.2
carbon source
L-Tryptophan (C)
-0.2
+0.1
+0.0
-0.2
+0.2
carbon source
L-Arabinose (C)
+0.2
-0.5
+0.1
-0.1
+0.2
stress
Thallium(I) acetate 0.002 mg/ml
+0.2
-0.2
-0.0
-0.1
+0.1
carbon source
L-Malic (C)
+0.1
-0.2
+0.2
-0.0
-0.1
carbon source
D-Glucose (C)
+0.1
-0.2
+0.2
+0.1
-0.1
carbon source
D-Glucosamine Hydrochloride (C)
+0.2
-0.5
+0.0
-0.1
+0.5
carbon source
L-Valine (C)
+0.1
-0.1
-0.0
+0.0
+0.2
carbon source
D,L-Lactate (C)
+0.1
+0.1
+0.2
-0.0
-0.2
carbon source
D-Glucosamine Hydrochloride (C)
-0.1
+0.0
+0.1
-0.0
+0.3
carbon source
D-Lactate (C)
+0.2
-0.3
-0.0
+0.0
+0.3
stress
Lomefloxacin 0.0004 mM
+0.1
+0.1
+0.0
-0.1
+0.1
carbon source
Glycerol (C)
+0.2
-0.1
-0.0
+0.1
+0.2
carbon source
succinate (C)
+0.2
+0.1
-0.0
+0.2
-0.2
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