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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PfGW456L13_3015 and PfGW456L13_3016 are separated by 296 nucleotides
PfGW456L13_3016 and PfGW456L13_3017 are separated by 134 nucleotides
PfGW456L13_3017 and PfGW456L13_3018 are separated by 11 nucleotides
PfGW456L13_3018 and PfGW456L13_3019 overlap by 4 nucleotides
PfGW456L13_3015 - Ribosyl nicotinamide transporter, PnuC-like, at 3,356,185 to 3,356,748
_3015
PfGW456L13_3016 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 3,357,045 to 3,357,875
_3016
PfGW456L13_3017 - Cold-shock DNA-binding domain, at 3,358,010 to 3,358,300
_3017
PfGW456L13_3018 - FIG00955061: hypothetical protein, at 3,358,312 to 3,358,671
_3018
PfGW456L13_3019 - Transcriptional regulator, LysR family, at 3,358,668 to 3,359,576
_3019
Group
Condition
PfGW456L13
_3015
PfGW456L13
_3016
PfGW456L13
_3017
PfGW456L13
_3018
PfGW456L13
_3019
carbon source
L-Lactate (C)
+0.0
+0.1
-5.9
+0.0
-0.3
carbon source
D-Gluconic Acid (C)
-0.0
+0.5
-3.8
-0.3
-0.1
carbon source
Putrescine (C)
-0.5
+0.4
-2.8
+0.2
+0.0
carbon source
a-Ketoglutaric (C)
-0.2
-0.0
-2.1
-0.1
+0.4
carbon source
D-Galactose (C)
-0.3
-0.4
-0.1
-0.3
-0.2
stress
Aluminum chloride 2.5 mM
-0.1
-0.3
-0.5
+0.1
-0.4
carbon source
L-Arabinose (C)
+0.3
-0.1
-0.7
+0.1
-0.2
carbon source
D-Fructose (C)
+0.1
+0.0
-1.2
+0.3
+0.2
stress
Cephalothin 3 mg/ml
+0.2
+0.1
-1.0
+0.1
-0.0
control
LB
+0.1
+0.3
-1.0
+0.0
+0.1
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
-0.1
-0.8
+0.5
-0.3
+0.3
nitrogen source
Gly-Glu (N)
+0.1
-0.5
+0.5
-0.4
-0.0
carbon source
L-Malic (C)
-0.2
+0.4
-0.6
-0.2
+0.2
stress
Lomefloxacin 0.0004 mM
-0.0
-0.1
-0.8
+0.6
+0.1
nitrogen source
Gly-DL-Asp (N)
-0.1
-0.3
+0.9
-0.1
-0.2
nitrogen source
L-Proline (N)
-0.3
-0.2
+0.9
-0.1
-0.2
stress
Bacitracin 1 mg/ml
+0.7
-0.4
-0.2
+0.1
+0.0
carbon source
L-Valine (C)
+0.0
+0.3
+0.6
-0.4
-0.1
nitrogen source
L-Lysine (N)
-0.1
+0.0
+1.1
-0.2
-0.2
nitrogen source
L-Citrulline (N)
-0.1
-0.0
+1.1
-0.3
+0.0
carbon source
D-Alanine (C)
+0.2
+0.2
+0.2
+0.4
-0.3
nitrogen source
L-Arginine (N)
-0.0
+0.3
+1.1
-0.6
+0.1
nitrogen source
Ammonium chloride (N)
-0.0
+0.0
+1.1
-0.2
-0.0
lb
LB
+0.1
-0.0
+1.4
-0.1
-0.4
nitrogen source
L-Tryptophan (N)
-0.1
+0.2
+1.1
-0.1
+0.0
nitrogen source
L-Phenylalanine (N)
-0.1
+0.0
+1.2
-0.0
-0.1
carbon source
D-Gluconic Acid (C)
+0.3
+0.3
+0.7
+0.3
-0.3
carbon source
octanoate (C)
-0.3
+0.6
+1.5
+0.3
-0.7
nitrogen source
D-Serine (N)
-0.2
+0.2
+1.5
-0.1
+0.0
carbon source
D-Lactate (C)
+0.3
+0.2
+0.9
+0.1
+0.1
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