Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens GW456-L13
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 116 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PfGW456L13_3001 and PfGW456L13_3002 overlap by 4 nucleotides
PfGW456L13_3002 and PfGW456L13_3003 are separated by 171 nucleotides
PfGW456L13_3003 and PfGW456L13_3004 are separated by 78 nucleotides
PfGW456L13_3004 and PfGW456L13_3005 are separated by 286 nucleotides
PfGW456L13_3001 - 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44), at 3,342,669 to 3,343,649
_3001
PfGW456L13_3002 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 3,343,646 to 3,345,169
_3002
PfGW456L13_3003 - Na+/H+ antiporter NhaB, at 3,345,341 to 3,346,843
_3003
PfGW456L13_3004 - Cell surface protein, at 3,346,922 to 3,348,211
_3004
PfGW456L13_3005 - FIG00960186: hypothetical protein, at 3,348,498 to 3,348,764
_3005
Group
Condition
PfGW456L13
_3001
PfGW456L13
_3002
PfGW456L13
_3003
PfGW456L13
_3004
PfGW456L13
_3005
carbon source
L-Glutamine (C)
-0.6
-0.4
-0.4
-0.0
-1.0
carbon source
D-Fructose (C)
+0.1
-0.1
+0.1
-0.1
-1.2
carbon source
octanoate (C)
+0.7
+0.2
-0.4
+0.0
-1.7
carbon source
D-Galactose (C)
-0.3
-0.1
-0.2
+0.0
-0.5
carbon source
D-Glucose (C)
-0.4
-0.0
+0.1
-0.0
-0.7
carbon source
D-Fructose (C)
-0.2
-0.1
+0.1
+0.3
-1.3
stress
Lomefloxacin 0.0004 mM
+0.1
+0.0
+0.2
-0.3
-1.1
carbon source
casaminos (C)
+0.1
-0.1
-0.3
+0.0
-0.6
carbon source
D-Mannose (C)
+0.1
+0.1
-0.6
+0.0
-0.3
stress
Cephalothin 3 mg/ml
+0.2
-0.1
-0.2
-0.1
-0.4
carbon source
Trisodium citrate (C)
-0.4
-0.1
-0.1
-0.1
+0.2
nitrogen source
L-Proline (N)
-0.1
+0.0
+0.2
+0.2
-0.9
nitrogen source
L-Aspartic Acid (N)
+0.1
+0.0
-0.8
+0.1
+0.1
carbon source
L-Malic (C)
+0.4
+0.2
+0.1
+0.0
-1.2
carbon source
L-Asparagine (C)
-0.5
-0.1
-0.1
+0.0
+0.2
control
LB control
-0.1
+0.2
+0.1
-0.2
-0.4
carbon source
D-Mannose (C)
-0.2
+0.1
-0.5
-0.0
+0.2
stress
Vancomycin 0.5 mg/ml
+0.2
-0.1
+0.0
+0.1
-0.6
stress
Vancomycin 0.125 mg/ml
+0.3
-0.1
+0.0
+0.0
-0.6
carbon source
a-Ketoglutaric (C)
+0.1
+0.1
+0.1
+0.2
-0.7
carbon source
D-Gluconic Acid (C)
+0.4
+0.3
-0.3
-0.1
-0.3
carbon source
a-Ketoglutaric (C)
-0.2
-0.2
-0.1
-0.3
+0.9
carbon source
L-Tryptophan (C)
+0.1
-0.2
+0.3
+0.1
-0.3
carbon source
D-Gluconic Acid (C)
+0.2
+0.2
-0.0
+0.3
-0.5
nitrogen source
Gly-DL-Asp (N)
+0.3
+0.2
-0.5
+0.0
+0.2
stress
KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x
+0.3
-0.0
-0.3
-0.2
+0.4
carbon source
L-Arabinose (C)
-0.2
+0.2
+0.3
+0.3
-0.2
lb
LB
+0.2
+0.1
-0.2
-0.0
+0.4
carbon source
L-Valine (C)
-0.3
+0.2
+0.1
+0.1
+0.5
carbon source
D,L-Lactate (C)
+0.1
+0.1
+0.2
-0.1
+0.5
remove
PfGW456L13_3001
plot
remove
PfGW456L13_3002
plot
remove
PfGW456L13_3003
remove
PfGW456L13_3004
plot
remove
PfGW456L13_3005
plot