Fitness for 5 genes in Pseudomonas fluorescens GW456-L13

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500 ntPfGW456L13_3001 and PfGW456L13_3002 overlap by 4 nucleotidesPfGW456L13_3002 and PfGW456L13_3003 are separated by 171 nucleotidesPfGW456L13_3003 and PfGW456L13_3004 are separated by 78 nucleotidesPfGW456L13_3004 and PfGW456L13_3005 are separated by 286 nucleotides PfGW456L13_3001 - 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44), at 3,342,669 to 3,343,649 _3001 PfGW456L13_3002 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 3,343,646 to 3,345,169 _3002 PfGW456L13_3003 - Na+/H+ antiporter NhaB, at 3,345,341 to 3,346,843 _3003 PfGW456L13_3004 - Cell surface protein, at 3,346,922 to 3,348,211 _3004 PfGW456L13_3005 - FIG00960186: hypothetical protein, at 3,348,498 to 3,348,764 _3005
Group Condition PfGW456L13_3001 PfGW456L13_3002 PfGW456L13_3003 PfGW456L13_3004 PfGW456L13_3005
carbon source L-Glutamine (C) -0.6 -0.4 -0.4 -0.0 -1.0
carbon source D-Fructose (C) +0.1 -0.1 +0.1 -0.1 -1.2
carbon source octanoate (C) +0.7 +0.2 -0.4 +0.0 -1.7
carbon source D-Galactose (C) -0.3 -0.1 -0.2 +0.0 -0.5
carbon source D-Glucose (C) -0.4 -0.0 +0.1 -0.0 -0.7
carbon source D-Fructose (C) -0.2 -0.1 +0.1 +0.3 -1.3
stress Lomefloxacin 0.0004 mM +0.1 +0.0 +0.2 -0.3 -1.1
carbon source casaminos (C) +0.1 -0.1 -0.3 +0.0 -0.6
carbon source D-Mannose (C) +0.1 +0.1 -0.6 +0.0 -0.3
stress Cephalothin 3 mg/ml +0.2 -0.1 -0.2 -0.1 -0.4
carbon source Trisodium citrate (C) -0.4 -0.1 -0.1 -0.1 +0.2
nitrogen source L-Proline (N) -0.1 +0.0 +0.2 +0.2 -0.9
nitrogen source L-Aspartic Acid (N) +0.1 +0.0 -0.8 +0.1 +0.1
carbon source L-Malic (C) +0.4 +0.2 +0.1 +0.0 -1.2
carbon source L-Asparagine (C) -0.5 -0.1 -0.1 +0.0 +0.2
control LB control -0.1 +0.2 +0.1 -0.2 -0.4
carbon source D-Mannose (C) -0.2 +0.1 -0.5 -0.0 +0.2
stress Vancomycin 0.5 mg/ml +0.2 -0.1 +0.0 +0.1 -0.6
stress Vancomycin 0.125 mg/ml +0.3 -0.1 +0.0 +0.0 -0.6
carbon source a-Ketoglutaric (C) +0.1 +0.1 +0.1 +0.2 -0.7
carbon source D-Gluconic Acid (C) +0.4 +0.3 -0.3 -0.1 -0.3
carbon source a-Ketoglutaric (C) -0.2 -0.2 -0.1 -0.3 +0.9
carbon source L-Tryptophan (C) +0.1 -0.2 +0.3 +0.1 -0.3
carbon source D-Gluconic Acid (C) +0.2 +0.2 -0.0 +0.3 -0.5
nitrogen source Gly-DL-Asp (N) +0.3 +0.2 -0.5 +0.0 +0.2
stress KB with PTLB purified from Pseudomonas sp. FW300-N2F2 0.008 x +0.3 -0.0 -0.3 -0.2 +0.4
carbon source L-Arabinose (C) -0.2 +0.2 +0.3 +0.3 -0.2
lb LB +0.2 +0.1 -0.2 -0.0 +0.4
carbon source L-Valine (C) -0.3 +0.2 +0.1 +0.1 +0.5
carbon source D,L-Lactate (C) +0.1 +0.1 +0.2 -0.1 +0.5
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